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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400010023 Potato endoplasmic reticulum 76.37 65.26
HORVU4Hr1G018180.1 Barley cytosol, golgi, plastid 57.14 59.09
AT4G22755.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 87.36 54.64
CDY41295 Canola cytosol 76.37 53.88
GSMUA_Achr8P19400_001 Banana plastid 68.68 52.3
CDX97357 Canola cytosol 79.67 51.79
CDY41294 Canola cytosol 81.87 50.0
CDY04397 Canola cytosol, plasma membrane, plastid 78.02 47.65
Solyc08g079570.2.1 Tomato cytosol 76.92 47.3
CDY06258 Canola cytosol 5.49 45.45
HORVU1Hr1G052890.1 Barley plasma membrane 74.73 45.18
TraesCS1D01G208900.1 Wheat plasma membrane 74.73 45.18
TraesCS1A01G205700.1 Wheat plasma membrane 74.73 45.18
TraesCS1B01G219200.2 Wheat plasma membrane 73.08 44.33
GSMUA_Achr5P19760_001 Banana plasma membrane 73.08 43.89
Os10t0545200-01 Rice cytosol, plasma membrane, plastid 72.53 43.85
EER94557 Sorghum cytosol 71.98 43.52
GSMUA_Achr11P... Banana plasma membrane 71.98 43.23
GSMUA_Achr5P18800_001 Banana cytosol, peroxisome, plasma membrane 68.13 41.33
KRH40602 Soybean cytosol, endoplasmic reticulum, plasma membrane 64.84 40.27
TraesCS4B01G332500.1 Wheat plasma membrane 62.09 38.97
HORVU4Hr1G080880.2 Barley plasma membrane 62.09 38.7
CDX82968 Canola plasma membrane 79.67 38.56
HORVU1Hr1G001170.1 Barley cytosol 59.89 38.52
GSMUA_Achr11P... Banana cytosol, peroxisome, plasma membrane 64.29 38.36
TraesCS4D01G329200.1 Wheat plasma membrane 60.99 38.28
Os03t0108500-01 Rice cytosol 62.64 38.0
TraesCS5A01G503600.2 Wheat cytosol, endoplasmic reticulum, plasma membrane 62.09 37.79
HORVU7Hr1G000980.3 Barley plasma membrane 58.79 37.28
TraesCS1D01G007100.1 Wheat cytosol, plasma membrane, plastid 59.34 36.36
TraesCS4B01G097200.1 Wheat cytosol, golgi, plasma membrane 59.89 36.21
TraesCS1D01G008900.1 Wheat plasma membrane 59.34 36.12
TraesCS4D01G093600.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 59.34 35.88
TraesCS4A01G218400.1 Wheat cytosol, golgi, plasma membrane 59.34 35.88
Zm00001d041458_P001 Maize plasma membrane 57.69 35.84
TraesCSU01G085800.1 Wheat cytosol, plasma membrane, plastid 58.79 35.79
OQU86919 Sorghum golgi, peroxisome, plasma membrane 57.69 35.59
TraesCS7A01G013400.1 Wheat plasma membrane 58.24 35.33
HORVU4Hr1G018150.1 Barley cytosol, golgi, plasma membrane 58.24 35.22
TraesCS5D01G422900.1 Wheat plasma membrane 54.4 34.14
TraesCS5A01G414500.1 Wheat plasma membrane 54.4 34.14
OQU80062 Sorghum plasma membrane 56.04 33.77
OQU79557 Sorghum golgi, peroxisome, plasma membrane 55.49 33.55
OQU79560 Sorghum endoplasmic reticulum, plasma membrane, plastid 53.3 33.22
CDX94121 Canola cytosol 43.96 32.39
Zm00001d029810_P001 Maize mitochondrion 70.88 31.46
CDY68059 Canola cytosol, plasma membrane 45.05 30.83
CDY51371 Canola cytosol 43.41 30.38
CDY09918 Canola cytosol, plasma membrane 43.41 30.27
CDY06704 Canola endoplasmic reticulum, plasma membrane 45.6 30.07
CDY06257 Canola cytosol, plastid 31.87 29.15
HORVU4Hr1G090810.1 Barley cytosol 60.99 29.13
OQU77931 Sorghum cytosol, endoplasmic reticulum, plasma membrane 36.26 28.95
Zm00001d040979_P001 Maize cytosol, plasma membrane, plastid 34.62 28.9
CDX97889 Canola golgi, plasma membrane 42.86 24.68
CDX86488 Canola cytosol 45.05 16.53
CDY10274 Canola cytosol 45.05 14.94
Protein Annotations
MapMan:5.5.2.1GO:A0A078K0U6UniProt:A0A078K0U6EnsemblPlants:CDY71421ProteinID:CDY71421ProteinID:CDY71421.1
InterPro:Fatty_acid_hydroxylaseGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0005575
GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0008610GO:GO:0009058GO:GO:0016020
GO:GO:0016021GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00014737001PFAM:PF04116PANTHER:PTHR11863
PANTHER:PTHR11863:SF67TMHMM:TMhelixUniParc:UPI0004EE0CA4SEG:seg::
Description
BnaAnng37370DBnaAnng37370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K0U6]
Coordinates
chrLK045739:+:180..1343
Molecular Weight (calculated)
21146.4 Da
IEP (calculated)
7.805
GRAVY (calculated)
-0.227
Length
182 amino acids
Sequence
(BLAST)
001: MAGIRSGLPL PSLMEIVAQL VVYFLIEDYT NYWIHRWLHC KWGYEKIHRV HHEYTSPIGY ASPYAHWAEV LLLGIPTFLG PAIAPGHIMT FWLWISLRQM
101: EAIETHSGYD LPWTLTKLVP FYGGAGYHDY HHYVGGKSQS NFASVFTYCD YIYGTDKGYR VHKKLLQQIK EEADQKGGRK YD
Best Arabidopsis Sequence Match ( AT1G07420.1 )
(BLAST)
001: MASFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN TPAAQGKCIT RLLLYHFSVN LPLMLASYPV FRAMGMRSSF
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
Arabidopsis Description
SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.