Subcellular Localization
min:
: max
Winner_takes_all: golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 59.09 | 57.14 |
| HORVU4Hr1G018150.1 | Barley | cytosol, golgi, plasma membrane | 95.45 | 55.81 |
| TraesCS4B01G097200.1 | Wheat | cytosol, golgi, plasma membrane | 94.89 | 55.48 |
| TraesCS4A01G218400.1 | Wheat | cytosol, golgi, plasma membrane | 94.89 | 55.48 |
| TraesCS4D01G093600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 93.75 | 54.82 |
| PGSC0003DMT400010023 | Potato | endoplasmic reticulum | 60.8 | 50.23 |
| HORVU4Hr1G080880.2 | Barley | plasma membrane | 69.89 | 42.12 |
| HORVU7Hr1G000980.3 | Barley | plasma membrane | 64.2 | 39.37 |
| GSMUA_Achr5P19760_001 | Banana | plasma membrane | 67.61 | 39.27 |
| GSMUA_Achr11P... | Banana | plasma membrane | 67.05 | 38.94 |
| HORVU1Hr1G052890.1 | Barley | plasma membrane | 66.48 | 38.87 |
| HORVU1Hr1G001170.1 | Barley | cytosol | 62.5 | 38.87 |
| OQU86919 | Sorghum | golgi, peroxisome, plasma membrane | 63.07 | 37.63 |
| CDY41294 | Canola | cytosol | 63.07 | 37.25 |
| CDX97357 | Canola | cytosol | 59.09 | 37.14 |
| KRH57309 | Soybean | endoplasmic reticulum | 62.5 | 37.04 |
| Solyc08g079570.2.1 | Tomato | cytosol | 60.8 | 36.15 |
| AT4G22756.1 | Thale cress | plasma membrane | 61.36 | 36.12 |
| AT4G22755.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 59.09 | 35.74 |
| OQU79557 | Sorghum | golgi, peroxisome, plasma membrane | 60.23 | 35.22 |
| AT4G12110.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 59.09 | 34.9 |
| Bra033117.1-P | Field mustard | cytosol | 59.09 | 34.9 |
| KRH40602 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 57.39 | 34.47 |
| OQU80062 | Sorghum | plasma membrane | 59.09 | 34.44 |
| Solyc01g091320.2.1 | Tomato | cytosol | 58.52 | 34.33 |
| CDY04397 | Canola | cytosol, plasma membrane, plastid | 57.95 | 34.23 |
| PGSC0003DMT400033236 | Potato | cytosol | 57.39 | 33.67 |
| Zm00001d041458_P001 | Maize | plasma membrane | 55.68 | 33.45 |
| Zm00001d040979_P001 | Maize | cytosol, plasma membrane, plastid | 40.91 | 33.03 |
| OQU79560 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 53.98 | 32.53 |
| CDY41295 | Canola | cytosol | 46.59 | 31.78 |
| HORVU4Hr1G090810.1 | Barley | cytosol | 67.05 | 30.97 |
| KRH04041 | Soybean | endoplasmic reticulum | 38.07 | 30.73 |
| CDX82968 | Canola | plasma membrane | 63.07 | 29.52 |
| VIT_00s2125g00010.t01 | Wine grape | cytosol | 36.93 | 29.41 |
| Bra013643.1-P | Field mustard | cytosol | 63.07 | 25.0 |
| CDX94121 | Canola | cytosol | 32.95 | 23.48 |
| KRH57571 | Soybean | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G018180.1 | EnsemblPlantsGene:HORVU4Hr1G018180 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 | GO:GO:0016491 |
| GO:GO:0055114 | InterPro:Fatty_acid_hydroxylase | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF51 | PFAM:PF04116 | UniParc:UPI000B481257 |
| UniProt:A0A287NEZ0 | MapMan:5.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:81636475..81638197
Molecular Weight (calculated)
20449.6 Da
IEP (calculated)
7.468
GRAVY (calculated)
0.022
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIRTGLPLP SMGEIAAQLT VYFLVEDYLN YWLHRLLHTK WCYEKIHHVH HEFTAPMAYA AWYGHWAEML ILAVPSLAGP ALVPCHVTTL WIWFAARLVE
101: SLNIHSGFKL PFNAEKYIPF YGGAEHHDYH HYIGGQSKSN FAPVFTYCDY IYGTDKGYRY HKATLAKVSF YQSIIF
101: SLNIHSGFKL PFNAEKYIPF YGGAEHHDYH HYIGGQSKSN FAPVFTYCDY IYGTDKGYRY HKATLAKVSF YQSIIF
001: MASFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN TPAAQGKCIT RLLLYHFSVN LPLMLASYPV FRAMGMRSSF
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
Arabidopsis Description
SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.