Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- endoplasmic reticulum 3
- vacuole 2
- extracellular 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 40.27 | 64.84 |
| KRH04041 | Soybean | endoplasmic reticulum | 47.1 | 63.3 |
| KRH57309 | Soybean | endoplasmic reticulum | 63.14 | 62.29 |
| GSMUA_Achr8P19400_001 | Banana | plastid | 49.49 | 60.67 |
| AT4G22755.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 60.07 | 60.48 |
| Bra033117.1-P | Field mustard | cytosol | 61.09 | 60.07 |
| CDY41295 | Canola | cytosol | 52.56 | 59.69 |
| CDX97357 | Canola | cytosol | 57.0 | 59.64 |
| AT4G22756.1 | Thale cress | plasma membrane | 60.41 | 59.2 |
| CDY04397 | Canola | cytosol, plasma membrane, plastid | 60.07 | 59.06 |
| AT4G12110.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 60.07 | 59.06 |
| Solyc01g091320.2.1 | Tomato | cytosol | 60.41 | 59.0 |
| PGSC0003DMT400033236 | Potato | cytosol | 60.41 | 59.0 |
| GSMUA_Achr5P19760_001 | Banana | plasma membrane | 60.07 | 58.09 |
| HORVU4Hr1G018180.1 | Barley | cytosol, golgi, plastid | 34.47 | 57.39 |
| CDY41294 | Canola | cytosol | 58.36 | 57.38 |
| Os10t0545200-01 | Rice | cytosol, plasma membrane, plastid | 58.36 | 56.81 |
| GSMUA_Achr11P... | Banana | plasma membrane | 58.7 | 56.77 |
| GSMUA_Achr5P18800_001 | Banana | cytosol, peroxisome, plasma membrane | 57.34 | 56.0 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plasma membrane | 57.68 | 55.41 |
| HORVU1Hr1G052890.1 | Barley | plasma membrane | 56.66 | 55.15 |
| TraesCS1B01G219200.2 | Wheat | plasma membrane | 55.97 | 54.67 |
| TraesCS1A01G205700.1 | Wheat | plasma membrane | 55.97 | 54.49 |
| TraesCS1D01G208900.1 | Wheat | plasma membrane | 55.97 | 54.49 |
| EER94557 | Sorghum | cytosol | 55.63 | 54.15 |
| TraesCS4B01G332500.1 | Wheat | plasma membrane | 50.85 | 51.38 |
| HORVU4Hr1G080880.2 | Barley | plasma membrane | 51.19 | 51.37 |
| Os03t0108500-01 | Rice | cytosol | 52.56 | 51.33 |
| KRH57571 | Soybean | plastid | 19.45 | 50.89 |
| TraesCS5A01G503600.2 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 51.54 | 50.5 |
| TraesCS4D01G329200.1 | Wheat | plasma membrane | 49.83 | 50.34 |
| HORVU1Hr1G001170.1 | Barley | cytosol | 48.46 | 50.18 |
| HORVU7Hr1G000980.3 | Barley | plasma membrane | 49.15 | 50.17 |
| TraesCS1D01G007100.1 | Wheat | cytosol, plasma membrane, plastid | 49.15 | 48.48 |
| TraesCS4A01G218400.1 | Wheat | cytosol, golgi, plasma membrane | 49.15 | 47.84 |
| TraesCS4B01G097200.1 | Wheat | cytosol, golgi, plasma membrane | 49.15 | 47.84 |
| TraesCS4D01G093600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 49.15 | 47.84 |
| HORVU4Hr1G018150.1 | Barley | cytosol, golgi, plasma membrane | 49.15 | 47.84 |
| TraesCS1D01G008900.1 | Wheat | plasma membrane | 48.81 | 47.83 |
| OQU86919 | Sorghum | golgi, peroxisome, plasma membrane | 48.12 | 47.8 |
| Zm00001d040979_P001 | Maize | cytosol, plasma membrane, plastid | 35.49 | 47.71 |
| TraesCSU01G085800.1 | Wheat | cytosol, plasma membrane, plastid | 48.46 | 47.49 |
| CDX82968 | Canola | plasma membrane | 58.36 | 45.48 |
| TraesCS7A01G013400.1 | Wheat | plasma membrane | 46.08 | 45.0 |
| OQU80062 | Sorghum | plasma membrane | 46.08 | 44.7 |
| Zm00001d041458_P001 | Maize | plasma membrane | 44.37 | 44.37 |
| TraesCS5A01G414500.1 | Wheat | plasma membrane | 43.69 | 44.14 |
| OQU77931 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 34.13 | 43.86 |
| TraesCS5D01G422900.1 | Wheat | plasma membrane | 43.34 | 43.79 |
| OQU79557 | Sorghum | golgi, peroxisome, plasma membrane | 43.69 | 42.52 |
| OQU79560 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 40.96 | 41.1 |
| Zm00001d029810_P001 | Maize | mitochondrion | 56.66 | 40.49 |
| HORVU4Hr1G090810.1 | Barley | cytosol | 51.19 | 39.37 |
| Bra013643.1-P | Field mustard | cytosol | 58.7 | 38.74 |
| KRH74668 | Soybean | extracellular, plasma membrane | 33.11 | 35.79 |
| KRH69485 | Soybean | mitochondrion | 32.42 | 35.06 |
| CDX94121 | Canola | cytosol | 26.28 | 31.17 |
| KRH74671 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 24.57 | 25.44 |
Protein Annotations
| MapMan:5.5.2.1 | EMBL:ACUP02006044 | InterPro:Fatty_acid_hydroxylase | EnsemblPlantsGene:GLYMA_09G269200 | GO:GO:0000254 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008610 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016126 | GO:GO:0016491 |
| GO:GO:0055114 | UniProt:I1L6V0 | EnsemblPlants:KRH40602 | ProteinID:KRH40602 | ProteinID:KRH40602.1 | PFAM:PF04116 |
| PANTHER:PTHR11863 | PANTHER:PTHR11863:SF67 | UniParc:UPI00023C872E | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:48655124..48661038
Molecular Weight (calculated)
34317.6 Da
IEP (calculated)
8.931
GRAVY (calculated)
-0.055
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPYHTLEGA QVALGRGLTL AETIWFKYSA NKPDFVLHCH NTLFLCLFYS IAPIPFVLME LSGYEKLNKH KIQPSVKRSF KEMFKCYKDV METFVIAVSP
101: LQIISYPTIK WIGIRTGLSL PSGWELFWQL FIYFVIEDFS NYWIHRMLHC KWAFEKIHKV HHEYVAPIGL SAPYAHWAEI IILGIPSFLG PALVPGHITT
201: YWLWFILRQL EAIETHSGYD FPWSPTKYIP FYGGPAYHDY HHYVGGKSQS NFASVFTYCD YIYGTHKGYQ YRKQMRKKNS TDTFIAQNYK MDG
101: LQIISYPTIK WIGIRTGLSL PSGWELFWQL FIYFVIEDFS NYWIHRMLHC KWAFEKIHKV HHEYVAPIGL SAPYAHWAEI IILGIPSFLG PALVPGHITT
201: YWLWFILRQL EAIETHSGYD FPWSPTKYIP FYGGPAYHDY HHYVGGKSQS NFASVFTYCD YIYGTHKGYQ YRKQMRKKNS TDTFIAQNYK MDG
001: MIPYATVEEA SIALGRNLTR LETLWFDYSA TKSDYYLYCH NILFLFLVFS LVPLPLVFVE LARSASGLFN RYKIQPKVNY SLSDMFKCYK DVMTMFILVV
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
101: GPLQLVSYPS IQMIEIRSGL PLPTITEMLS QLVVYFLIED YTNYWVHRFF HSKWGYDKIH RVHHEYTAPI GYAAPYAHWA EVLLLGIPTF MGPAIAPGHM
201: ITFWLWIALR QMEAIETHSG YDFPWSPTKY IPFYGGAEYH DYHHYVGGQS QSNFASVFTY CDYIYGTDKG YRFQKKLLEQ IKESSKKSNK HNGGIKSD
Arabidopsis Description
SMO1-1SMO1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UWJ7]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.