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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY09918 Canola cytosol, plasma membrane 76.38 58.24
CDY68059 Canola cytosol, plasma membrane 76.88 57.52
AT1G07420.1 Thale cress endoplasmic reticulum, golgi 76.38 57.14
CDY06704 Canola endoplasmic reticulum, plasma membrane 75.38 54.35
CDY51371 Canola cytosol 67.84 51.92
KRH69485 Soybean mitochondrion 69.85 51.29
KRH74668 Soybean extracellular, plasma membrane 69.35 50.92
VIT_06s0004g05470.t01 Wine grape extracellular, plasma membrane 67.34 49.45
PGSC0003DMT400078196 Potato endoplasmic reticulum, plasma membrane 66.33 49.07
Solyc06g076410.2.1 Tomato endoplasmic reticulum, plasma membrane 65.83 48.7
GSMUA_Achr7P10640_001 Banana extracellular, plasma membrane 62.31 46.79
GSMUA_Achr6P04970_001 Banana extracellular, plasma membrane 61.81 46.59
GSMUA_Achr9P03480_001 Banana endoplasmic reticulum, plasma membrane 61.31 45.69
Solyc06g005750.2.1 Tomato extracellular, plasma membrane 60.3 45.28
PGSC0003DMT400005519 Potato extracellular, plasma membrane 59.8 44.74
Os07t0101500-01 Rice cytosol, endoplasmic reticulum, plasma membrane 58.79 43.66
Zm00001d011765_P002 Maize endoplasmic reticulum 57.79 43.4
TraesCS4B01G139900.1 Wheat endoplasmic reticulum 57.79 43.23
TraesCS4A01G179800.1 Wheat endoplasmic reticulum 57.79 43.23
TraesCS4D01G134600.1 Wheat endoplasmic reticulum 57.79 43.23
CDX97889 Canola golgi, plasma membrane 68.34 43.04
Zm00001d048585_P002 Maize plasma membrane 57.79 42.91
EER92925 Sorghum endoplasmic reticulum, plasma membrane 57.79 42.91
Os11t0707600-02 Rice cytosol, endoplasmic reticulum, plasma membrane 57.29 42.86
GSMUA_Achr10P... Banana cytosol 61.81 40.33
CDY71421 Canola endoplasmic reticulum, extracellular, plasma membrane 29.15 31.87
CDX86488 Canola cytosol 73.37 29.44
CDY41295 Canola cytosol 36.68 28.29
CDY10274 Canola cytosol 72.36 26.23
CDX97357 Canola cytosol 35.18 25.0
CDY41294 Canola cytosol 35.68 23.83
CDY04397 Canola cytosol, plasma membrane, plastid 35.68 23.83
KRH74671 Soybean endoplasmic reticulum, extracellular, plasma membrane 32.66 22.97
CDX82968 Canola plasma membrane 35.68 18.88
CDX94121 Canola cytosol 16.58 13.36
CDY06258 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY06257EnsemblPlantsGene:GSBRNA2T00122174001GO:A0A078EZ82GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005506GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0008610GO:GO:0009058
GO:GO:0016491GO:GO:0055114InterPro:Fatty_acid_hydroxylasePANTHER:PTHR11863PANTHER:PTHR11863:SF96PFAM:PF04116
ProteinID:CDY06257ProteinID:CDY06257.1SEG:segUniParc:UPI0004EE9541MapMan:5.5.2.1:
Description
BnaA09g49460D
Coordinates
chrLK031968:+:496175..497929
Molecular Weight (calculated)
22791.5 Da
IEP (calculated)
8.595
GRAVY (calculated)
0.234
Length
199 amino acids
Sequence
(BLAST)
001: MASLVESGWQ YLVTHYSDFQ LACIGSFLLH AKASSSYLAS LSFIWKDKAF SPNTKSRQKT TRLQLKKNAS LASCFIISAS FPLPSWKEVS AQILFYFIIE
101: DFVFYWGHRI LHSKWLYKNV HSVHHEYATP FGLTSEYAHP DKILFLGFAT IVGPALTGPH LITLWLWMVL RVLETVEAHC GYHFPWSLSD FLPLYGGFC
Best Arabidopsis Sequence Match ( AT1G07420.1 )
(BLAST)
001: MASFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN TPAAQGKCIT RLLLYHFSVN LPLMLASYPV FRAMGMRSSF
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
Arabidopsis Description
SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.