Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- endoplasmic reticulum 4
- vacuole 3
- extracellular 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400078196 | Potato | endoplasmic reticulum, plasma membrane | 99.26 | 99.26 |
| CDY09918 | Canola | cytosol, plasma membrane | 84.01 | 86.59 |
| AT1G07420.1 | Thale cress | endoplasmic reticulum, golgi | 84.01 | 84.96 |
| CDY68059 | Canola | cytosol, plasma membrane | 84.01 | 84.96 |
| KRH74668 | Soybean | extracellular, plasma membrane | 84.39 | 83.76 |
| KRH69485 | Soybean | mitochondrion | 84.01 | 83.39 |
| CDY06704 | Canola | endoplasmic reticulum, plasma membrane | 85.13 | 82.97 |
| VIT_06s0004g05470.t01 | Wine grape | extracellular, plasma membrane | 82.9 | 82.29 |
| Solyc06g005750.2.1 | Tomato | extracellular, plasma membrane | 80.3 | 81.51 |
| CDY51371 | Canola | cytosol | 77.32 | 80.0 |
| AT2G29390.1 | Thale cress | cytosol | 80.67 | 79.78 |
| GSMUA_Achr7P10640_001 | Banana | extracellular, plasma membrane | 76.21 | 77.36 |
| GSMUA_Achr6P04970_001 | Banana | extracellular, plasma membrane | 73.98 | 75.38 |
| GSMUA_Achr9P03480_001 | Banana | endoplasmic reticulum, plasma membrane | 73.98 | 74.53 |
| TraesCS4A01G179800.1 | Wheat | endoplasmic reticulum | 73.23 | 74.06 |
| TraesCS4B01G139900.1 | Wheat | endoplasmic reticulum | 72.86 | 73.68 |
| TraesCS4D01G134600.1 | Wheat | endoplasmic reticulum | 72.49 | 73.31 |
| CDY06258 | Canola | cytosol | 5.95 | 72.73 |
| Os07t0101500-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 72.12 | 72.39 |
| Os11t0707600-02 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 71.38 | 72.18 |
| Zm00001d048585_P002 | Maize | plasma membrane | 71.75 | 72.01 |
| EER92925 | Sorghum | endoplasmic reticulum, plasma membrane | 71.75 | 72.01 |
| Zm00001d011765_P002 | Maize | endoplasmic reticulum | 70.63 | 71.7 |
| GSMUA_Achr10P... | Banana | cytosol | 75.46 | 66.56 |
| CDY06257 | Canola | cytosol, plastid | 48.7 | 65.83 |
| CDX97889 | Canola | golgi, plasma membrane | 77.32 | 65.82 |
| Bra039978.1-P | Field mustard | endoplasmic reticulum, golgi | 75.46 | 63.24 |
| KRH74671 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 55.76 | 53.0 |
| CDX86488 | Canola | cytosol | 82.53 | 44.76 |
| Bra030681.1-P | Field mustard | cytosol | 82.16 | 42.75 |
| CDY10274 | Canola | cytosol | 82.9 | 40.62 |
| Solyc08g079570.2.1 | Tomato | cytosol | 39.78 | 36.15 |
| Solyc01g091320.2.1 | Tomato | cytosol | 37.17 | 33.33 |
Protein Annotations
| MapMan:5.5.2.1 | UniProt:F6M7C4 | InterPro:Fatty_acid_hydroxylase | GO:GO:0000254 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005789 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016126 | GO:GO:0016491 |
| GO:GO:0055114 | GO:GO:0080065 | EMBL:JF732929 | PFAM:PF04116 | PANTHER:PTHR11863 | PANTHER:PTHR11863:SF96 |
| EnsemblPlantsGene:Solyc06g076410.2 | EnsemblPlants:Solyc06g076410.2.1 | TMHMM:TMhelix | UniParc:UPI00020C1D06 | : | : |
Description
C-4 methyl sterol oxidase [Source:UniProtKB/TrEMBL;Acc:F6M7C4]
Coordinates
chr6:-:47475735..47482096
Molecular Weight (calculated)
31365.3 Da
IEP (calculated)
7.977
GRAVY (calculated)
0.176
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MASMIESAWT YLITNFNDFQ LACLGSFFLH ESVFFLSGLP FILLERAGWL SKYKIQTKNN TPAAQEKCIT RLLLYHFCVN LPLMMASYPV FKLMGMRNTL
101: PLPSWKVIST QVLFYFILED FVFYWGHRIL HTKWLYKHVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPIITGPHL ITLWLWMIVR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWLFGTDKG YRRLKVLKSD ACEAEGKEM
101: PLPSWKVIST QVLFYFILED FVFYWGHRIL HTKWLYKHVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPIITGPHL ITLWLWMIVR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWLFGTDKG YRRLKVLKSD ACEAEGKEM
001: MASFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN TPAAQGKCIT RLLLYHFSVN LPLMLASYPV FRAMGMRSSF
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT
Arabidopsis Description
SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.