Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- extracellular 1
- golgi 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G29390.1 | Thale cress | cytosol | 91.92 | 87.87 |
| CDY09918 | Canola | cytosol, plasma membrane | 86.15 | 85.82 |
| CDY68059 | Canola | cytosol, plasma membrane | 85.77 | 83.83 |
| CDX97889 | Canola | golgi, plasma membrane | 98.46 | 81.01 |
| CDY06704 | Canola | endoplasmic reticulum, plasma membrane | 85.0 | 80.07 |
| PGSC0003DMT400078196 | Potato | endoplasmic reticulum, plasma membrane | 80.38 | 77.7 |
| KRH69485 | Soybean | mitochondrion | 80.77 | 77.49 |
| Solyc06g076410.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 80.0 | 77.32 |
| CDY06258 | Canola | cytosol | 6.54 | 77.27 |
| KRH74668 | Soybean | extracellular, plasma membrane | 80.38 | 77.12 |
| Bra039978.1-P | Field mustard | endoplasmic reticulum, golgi | 94.62 | 76.64 |
| PGSC0003DMT400005519 | Potato | extracellular, plasma membrane | 77.31 | 75.56 |
| Solyc06g005750.2.1 | Tomato | extracellular, plasma membrane | 76.92 | 75.47 |
| VIT_06s0004g05470.t01 | Wine grape | extracellular, plasma membrane | 78.08 | 74.91 |
| GSMUA_Achr7P10640_001 | Banana | extracellular, plasma membrane | 75.77 | 74.34 |
| GSMUA_Achr9P03480_001 | Banana | endoplasmic reticulum, plasma membrane | 76.15 | 74.16 |
| GSMUA_Achr6P04970_001 | Banana | extracellular, plasma membrane | 74.23 | 73.11 |
| Os07t0101500-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 73.46 | 71.27 |
| TraesCS4A01G179800.1 | Wheat | endoplasmic reticulum | 71.54 | 69.92 |
| TraesCS4B01G139900.1 | Wheat | endoplasmic reticulum | 71.54 | 69.92 |
| TraesCS4D01G134600.1 | Wheat | endoplasmic reticulum | 71.54 | 69.92 |
| Zm00001d048585_P002 | Maize | plasma membrane | 71.92 | 69.78 |
| EER92925 | Sorghum | endoplasmic reticulum, plasma membrane | 71.92 | 69.78 |
| Os11t0707600-02 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 70.77 | 69.17 |
| Zm00001d011765_P002 | Maize | endoplasmic reticulum | 70.38 | 69.06 |
| CDY06257 | Canola | cytosol, plastid | 51.92 | 67.84 |
| GSMUA_Achr10P... | Banana | cytosol | 75.38 | 64.26 |
| KRH74671 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 50.38 | 46.29 |
| CDY71421 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 30.38 | 43.41 |
| CDX86488 | Canola | cytosol | 82.69 | 43.35 |
| CDY10274 | Canola | cytosol | 81.92 | 38.8 |
| CDX97357 | Canola | cytosol | 40.0 | 37.14 |
| CDY41295 | Canola | cytosol | 34.62 | 34.88 |
| CDY41294 | Canola | cytosol | 39.62 | 34.56 |
| CDY04397 | Canola | cytosol, plasma membrane, plastid | 39.62 | 34.56 |
| CDX82968 | Canola | plasma membrane | 39.62 | 27.39 |
| CDX94121 | Canola | cytosol | 21.92 | 23.08 |
Protein Annotations
| MapMan:5.5.2.1 | GO:A0A078IN13 | UniProt:A0A078IN13 | EnsemblPlants:CDY51371 | ProteinID:CDY51371 | ProteinID:CDY51371.1 |
| InterPro:Fatty_acid_hydroxylase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00003278001 | PFAM:PF04116 | PANTHER:PTHR11863 |
| PANTHER:PTHR11863:SF96 | TMHMM:TMhelix | UniParc:UPI0004EE9574 | : | : | : |
Description
BnaA04g28650DBnaA04g28650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IN13]
Coordinates
chrLK032988:+:69035..70738
Molecular Weight (calculated)
30385.8 Da
IEP (calculated)
8.045
GRAVY (calculated)
0.177
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLVESGWQ YLVSNFSDFQ LACIGSFIVH ETVFFLSGLP YIFLERTGLL STYKIQTKHN TPEAQGKCIA WLLFYHSCVN FPLMMFSYRV FKFMGMRSSF
101: PLPSWKVVSA QILFFFIIED FVFYWGHRIL HTKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATF IGPALTGPHL ITLWLWLVLR VIETVEAHCG
201: YHFPWSPSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRKLKALKET
101: PLPSWKVVSA QILFFFIIED FVFYWGHRIL HTKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATF IGPALTGPHL ITLWLWLVLR VIETVEAHCG
201: YHFPWSPSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRKLKALKET
001: MDSLVESGWK YLVTHFSDFQ LACIGSFILH ESVFFLSGLP YIFLERTGFL SNYKIQTKSN TPEAQGKCIA RLLLYHCCVN LPLMMASYPV FRFMGMESSF
101: PLPSWKVVSA QILFYFIIED FVFYWGHRIL HTKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMMLR VIETVEAHCG
201: YHFPWSPSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRKLKALKET
101: PLPSWKVVSA QILFYFIIED FVFYWGHRIL HTKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMMLR VIETVEAHCG
201: YHFPWSPSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRKLKALKET
Arabidopsis Description
SMO2-1Methylsterol monooxygenase 2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW22]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.