Factsheet for Bra039978.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, endoplasmic reticulum

Predictor Summary:

nucleus 1
endoplasmic reticulum 4
plastid 1
vacuole 3
extracellular 2
golgi 3
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	endoplasmic reticulum
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51371	Canola	cytosol	76.64	94.62
AT2G29390.1	Thale cress	cytosol	70.72	83.46
CDX97889	Canola	golgi, plasma membrane	76.95	78.16
PGSC0003DMT400078196	Potato	endoplasmic reticulum, plasma membrane	63.55	75.84
Solyc06g076410.2.1	Tomato	endoplasmic reticulum, plasma membrane	63.24	75.46
KRH69485	Soybean	mitochondrion	62.93	74.54
KRH74668	Soybean	extracellular, plasma membrane	62.62	74.17
PGSC0003DMT400005519	Potato	extracellular, plasma membrane	61.06	73.68
Solyc06g005750.2.1	Tomato	extracellular, plasma membrane	60.75	73.58
VIT_06s0004g05470.t01	Wine grape	extracellular, plasma membrane	60.75	71.96
GSMUA_Achr7P10640_001	Banana	extracellular, plasma membrane	59.19	71.7
GSMUA_Achr9P03480_001	Banana	endoplasmic reticulum, plasma membrane	59.5	71.54
GSMUA_Achr6P04970_001	Banana	extracellular, plasma membrane	58.26	70.83
Os07t0101500-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	57.94	69.4
TraesCS4D01G134600.1	Wheat	endoplasmic reticulum	57.32	69.17
TraesCS4A01G179800.1	Wheat	endoplasmic reticulum	57.32	69.17
TraesCS4B01G139900.1	Wheat	endoplasmic reticulum	57.32	69.17
Zm00001d048585_P002	Maize	plasma membrane	57.63	69.03
EER92925	Sorghum	endoplasmic reticulum, plasma membrane	57.32	68.66
Os11t0707600-02	Rice	cytosol, endoplasmic reticulum, plasma membrane	56.7	68.42
Zm00001d011765_P002	Maize	endoplasmic reticulum	56.07	67.92
GSMUA_Achr10P...	Banana	cytosol	59.5	62.62
KRH74671	Soybean	endoplasmic reticulum, extracellular, plasma membrane	40.19	45.58
Bra030681.1-P	Field mustard	cytosol	66.04	41.01
Bra033117.1-P	Field mustard	cytosol	32.09	34.56
Bra013643.1-P	Field mustard	cytosol	31.46	22.75

Protein Annotations

MapMan:5.5.2.1	EnsemblPlantsGene:Bra039978	EnsemblPlants:Bra039978.1	EnsemblPlants:Bra039978.1-P	InterPro:Fatty_acid_hydroxylase	GO:GO:0000254
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0008610	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016126	GO:GO:0016491	GO:GO:0055114	GO:GO:0080065	UniProt:M4FFV4
PFAM:PF04116	PANTHER:PTHR11863	PANTHER:PTHR11863:SF96	TMHMM:TMhelix	UniParc:UPI0002544405	:

Description

AT2G29390 (E=6e-139) ATSMO2 | SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase

Coordinates

chrA04:-:13205738..13207590

Molecular Weight (calculated)

37217.6 Da

IEP (calculated)

8.264

GRAVY (calculated)

0.389

Length

321 amino acids

Sequence
(BLAST)

001: MDSLVESGWQ VYTMLLSKCA YACICLVRLI LVCGVVHRIG LLWPLRACCF RSGSISNIIT ALESLLEALV YVWHMNFVDF QLACIGSFIV HETVFFLSGL
101: PYIFLERTGL LSTYKIQTKH NTPEAQGKCI AWLLFYHSCV NFPLMMFSYR VFKFMGMRSS FPLPSWKVVS AQILFFFIIE DFVFYWGHRI LHTKWLYKNV
201: HSVHHEYATP FGLTSEYAHP AEILFLGFAT FIGPALTGPH LITLWLWLVL RVIETVEAHC GYHFPWSPSN FLPLYGGADF HDYHHRLLYT KSGNYSSTFV
301: YMDWIFGTDK GYRKLKALKE T

Best Arabidopsis Sequence Match ( AT2G29390.3 )
(BLAST)

001: MMQYLVTHFS DFQLACIGSF ILHESVFFLS GLPYIFLERT GFLSNYKIQT KSNTPEAQGK CIARLLLYHC CVNLPLMMAS YPVFRFMGME SSFPLPSWKV
101: VSAQILFYFI IEDFVFYWGH RILHTKWLYK NVHSVHHEYA TPFGLTSEYA HPAEILFLGF ATIVGPALTG PHLITLWLWM MLRVIETVEA HCGYHFPWSP
201: SNFLPLYGGA DFHDYHHRLL YTKSGNYSST FVYMDWIFGT DKGYRKLKAL KET

Arabidopsis Description

SMO2-1Methylsterol monooxygenase 2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW22]
SUBAcon: [plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.