Factsheet for Bra030681.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86488	Canola	cytosol	92.07	95.97
AT1G07420.1	Thale cress	endoplasmic reticulum, golgi	47.39	92.11
PGSC0003DMT400078196	Potato	endoplasmic reticulum, plasma membrane	42.94	82.53
Solyc06g076410.2.1	Tomato	endoplasmic reticulum, plasma membrane	42.75	82.16
KRH69485	Soybean	mitochondrion	42.36	80.81
KRH74668	Soybean	extracellular, plasma membrane	41.97	80.07
VIT_06s0004g05470.t01	Wine grape	extracellular, plasma membrane	41.39	78.97
GSMUA_Achr7P10640_001	Banana	extracellular, plasma membrane	38.3	74.72
GSMUA_Achr6P04970_001	Banana	extracellular, plasma membrane	38.1	74.62
GSMUA_Achr9P03480_001	Banana	endoplasmic reticulum, plasma membrane	38.49	74.53
Solyc06g005750.2.1	Tomato	extracellular, plasma membrane	37.52	73.21
PGSC0003DMT400005519	Potato	extracellular, plasma membrane	37.52	72.93
TraesCS4B01G139900.1	Wheat	endoplasmic reticulum	36.94	71.8
TraesCS4A01G179800.1	Wheat	endoplasmic reticulum	36.75	71.43
TraesCS4D01G134600.1	Wheat	endoplasmic reticulum	36.75	71.43
EER92925	Sorghum	endoplasmic reticulum, plasma membrane	36.94	71.27
Os07t0101500-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	36.94	71.27
Os11t0707600-02	Rice	cytosol, endoplasmic reticulum, plasma membrane	36.36	70.68
Zm00001d011765_P002	Maize	endoplasmic reticulum	36.17	70.57
Zm00001d048585_P002	Maize	plasma membrane	36.56	70.52
Bra039978.1-P	Field mustard	endoplasmic reticulum, golgi	41.01	66.04
GSMUA_Achr10P...	Banana	cytosol	38.88	65.9
KRH74671	Soybean	endoplasmic reticulum, extracellular, plasma membrane	26.31	48.06
Bra033117.1-P	Field mustard	cytosol	21.47	37.25
Bra013643.1-P	Field mustard	cytosol	21.08	24.55

Protein Annotations

Gene3D:3.40.50.300	MapMan:5.5.2.1	EnsemblPlantsGene:Bra030681	EnsemblPlants:Bra030681.1	EnsemblPlants:Bra030681.1-P	InterPro:Fatty_acid_hydroxylase
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005506
GO:GO:0005525	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008610
GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016787	GO:GO:0055114
UniProt:M4EPG1	InterPro:P-loop_NTPase	PFAM:PF00071	PFAM:PF04116	PRINTS:PR00449	ScanProsite:PS00675
PFscan:PS51419	PANTHER:PTHR11863	PANTHER:PTHR11863:SF96	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Sigma_54_int_dom_ATP-bd_1	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
TMHMM:TMhelix	UniParc:UPI0002546D6D	:	:	:	:

Description

AT1G07420 (E=2e-155) ATSMO2, SMO2-1 | SMO2-1 (STEROL 4-ALPHA-METHYL-OXIDASE 2-1); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase

Coordinates

chrA08:-:20827086..20831464

Molecular Weight (calculated)

58583.5 Da

IEP (calculated)

8.419

GRAVY (calculated)

-0.004

Length

517 amino acids

Sequence
(BLAST)

001: MANHRLDNEY DYLFKIVLIG DSGVGKSNIL SRFTRNEFCL ESKSTIGVEF ATRTLQVIRV RVFRNLLGTV HISDQFNSGN VGFIRVEGKT VKAQIWDTAG
101: QERYRAITSA YYRGAVGALL VYDITKRQTF ENSLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAS NIEKAFQTIL
201: SEIYHIISKK ALAAQEAAGG LPVPGQGTAI NISESSVVAS LSPPLALIDP SMASLVESGW QYLVTHFSDF QLACIGSFLL HESVFFLSGL PFIYLERHGF
301: LTKYKIQAKN NTPAAQGKCI TRLLLYHFCV NLPLMMASYP VFRAMGMRSS FPLPSWKEVS AQILFYFIIE DFVFYWGHRI LHSKWLYKNV HSVHHEYATP
401: FGLTSEYAHP AEILFLGFAT IVGPALTGPH LITLWLWMVL RVLETVEAHC GYHFPWSLSN FLPLYGGADF HDYHHRLLYT KSGNYSSTFV YMDWIFGTDK
501: GYRRLKSLKE NSNLKQT

Best Arabidopsis Sequence Match ( AT1G07420.1 )
(BLAST)

001: MASFVESGWQ YLVTHFSDFQ LACIGSFLLH ESVFFLSGLP FIFLERQGFL SKYKIQTKNN TPAAQGKCIT RLLLYHFSVN LPLMLASYPV FRAMGMRSSF
101: PLPSWKEVSA QILFYFIIED FVFYWGHRIL HSKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL ITLWLWMVLR VLETVEAHCG
201: YHFPWSLSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY MDWIFGTDKG YRRLKTLKEN GDMKQT

Arabidopsis Description

SMO2-2Methylsterol monooxygenase 2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWZ8]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.