Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
- plasma membrane 2
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G61870.1 | KRG97393 | AT1G27300.1 | 21798944 |
| AT3G61870.1 | KRH31520 | AT1G27300.1 | 21798944 |
| AT3G61870.1 | KRH76090 | AT1G27300.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P18690_001 | Banana | cytosol | 56.25 | 72.51 |
| KRG97220 | Soybean | plastid | 67.65 | 66.43 |
| VIT_15s0048g02980.t01 | Wine grape | plastid | 66.18 | 65.93 |
| PGSC0003DMT400000359 | Potato | cytosol | 65.07 | 64.13 |
| KRH68940 | Soybean | nucleus | 54.78 | 63.95 |
| Solyc01g096240.2.1 | Tomato | plastid | 64.71 | 63.77 |
| GSMUA_Achr3P13860_001 | Banana | plastid | 64.34 | 61.84 |
| CDX71700 | Canola | plastid | 61.03 | 60.81 |
| CDY57873 | Canola | plastid | 60.29 | 60.29 |
| AT3G61870.1 | Thale cress | plastid | 59.93 | 59.93 |
| Bra007634.1-P | Field mustard | plastid | 60.29 | 59.85 |
| TraesCS6A01G066100.1 | Wheat | plastid | 56.62 | 55.8 |
| TraesCS6B01G089400.1 | Wheat | plastid | 56.62 | 55.0 |
| TraesCSU01G117800.1 | Wheat | plastid | 55.51 | 54.51 |
| Os02t0122500-00 | Rice | plastid | 55.51 | 54.12 |
| EES06198 | Sorghum | plastid | 56.62 | 53.29 |
| Zm00001d053925_P001 | Maize | plastid | 55.15 | 51.9 |
Protein Annotations
| EMBL:ACUP02009831 | EMBL:BT098116 | EnsemblPlants:KRH06415 | EnsemblPlantsGene:GLYMA_16G021600 | EntrezGene:100780348 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF4079 | PANTHER:PTHR34679 | PANTHER:PTHR34679:SF2 | PFAM:PF13301 |
| ProteinID:KRH06415 | ProteinID:KRH06415.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0001B16B26 | UniProt:C6TKB0 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr16:-:2041419..2043553
Molecular Weight (calculated)
30111.1 Da
IEP (calculated)
9.436
GRAVY (calculated)
0.167
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLMASTLPF PTLSILPHKA HCKSTPKLHP LPHISSRLNV VSKDPPILLD QSCNVLKNAS LSLTSITLPF LLEQKDVALA VEGEFGILEG RTFALIHPIV
101: MASLFLYTLW AGYLGWQWRR VRTIQNEINE LKKQVKPTPV TPEEVPPPSE IELKIQQLTE ERKELLKGSY KDRHYNAGSI LLGFGVLEAV GGGLNTWIRT
201: GKLFPGPHLF GGAAIAVLWA LSAALVPSMQ RGSETARSLH IALNTLNVLL FVSQLPTGFD ILLKVFEFTN WP
101: MASLFLYTLW AGYLGWQWRR VRTIQNEINE LKKQVKPTPV TPEEVPPPSE IELKIQQLTE ERKELLKGSY KDRHYNAGSI LLGFGVLEAV GGGLNTWIRT
201: GKLFPGPHLF GGAAIAVLWA LSAALVPSMQ RGSETARSLH IALNTLNVLL FVSQLPTGFD ILLKVFEFTN WP
001: MATTLHCLST LHLLPRTHHP KTLNSLKPIT TKSQPCKTPE IPSTPNALQL LKSSSLPLAV IALPFFLDPQ DAAAAGGEFG ILEGRSFALI HPIVMGGLFA
101: YTLWTGYLGW QWRRVRTIQS EISDLKKQLK PTPVSPDGST AVDSSSPPST TELQIQRLTE ERKELVKGSY RDKHFDAGSV LLGFGVLEAV FGGVNTYLRT
201: GKLFPGPHLY AGAGITVLWA AAAALVPAMQ KGNDTARSLH IALNAVNVLL FIWQIPTGLD IVLKVFEFTK WP
101: YTLWTGYLGW QWRRVRTIQS EISDLKKQLK PTPVSPDGST AVDSSSPPST TELQIQRLTE ERKELVKGSY RDKHFDAGSV LLGFGVLEAV FGGVNTYLRT
201: GKLFPGPHLY AGAGITVLWA AAAALVPAMQ KGNDTARSLH IALNAVNVLL FIWQIPTGLD IVLKVFEFTK WP
Arabidopsis Description
AT3g61870/F21F14_40 [Source:UniProtKB/TrEMBL;Acc:Q9M277]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.