Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71700 | Canola | plastid | 85.66 | 85.35 |
| CDY57873 | Canola | plastid | 84.93 | 84.93 |
| Bra007634.1-P | Field mustard | plastid | 84.93 | 84.31 |
| GSMUA_Achr1P18690_001 | Banana | cytosol | 52.57 | 67.77 |
| PGSC0003DMT400000359 | Potato | cytosol | 64.34 | 63.41 |
| Solyc01g096240.2.1 | Tomato | plastid | 63.97 | 63.04 |
| VIT_15s0048g02980.t01 | Wine grape | plastid | 62.5 | 62.27 |
| KRG97220 | Soybean | plastid | 61.76 | 60.65 |
| KRH06415 | Soybean | plastid | 59.93 | 59.93 |
| Os02t0122500-00 | Rice | plastid | 59.56 | 58.06 |
| GSMUA_Achr3P13860_001 | Banana | plastid | 59.93 | 57.6 |
| TraesCS6A01G066100.1 | Wheat | plastid | 57.35 | 56.52 |
| KRH68940 | Soybean | nucleus | 48.16 | 56.22 |
| TraesCS6B01G089400.1 | Wheat | plastid | 57.35 | 55.71 |
| TraesCSU01G117800.1 | Wheat | plastid | 56.25 | 55.23 |
| EES06198 | Sorghum | plastid | 57.35 | 53.98 |
| Zm00001d053925_P001 | Maize | plastid | 56.62 | 53.29 |
Protein Annotations
| MapMan:35.2 | EntrezGene:825360 | UniProt:A0A178VHB0 | ProteinID:AEE80272.1 | ArrayExpress:AT3G61870 | EnsemblPlantsGene:AT3G61870 |
| RefSeq:AT3G61870 | TAIR:AT3G61870 | RefSeq:AT3G61870-TAIR-G | EnsemblPlants:AT3G61870.1 | TAIR:AT3G61870.1 | EMBL:AY058164 |
| EMBL:AY098978 | Unigene:At.22960 | ProteinID:CAB71894.1 | InterPro:DUF4079 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009534 | GO:GO:0009536 |
| GO:GO:0009579 | GO:GO:0009706 | GO:GO:0009941 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_191746.1 |
| ProteinID:OAP05144.1 | PFAM:PF13301 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR34679 | PANTHER:PTHR34679:SF2 | UniProt:Q9M277 |
| TMHMM:TMhelix | UniParc:UPI00000A1AD9 | SEG:seg | : | : | : |
Description
AT3g61870/F21F14_40 [Source:UniProtKB/TrEMBL;Acc:Q9M277]
Coordinates
chr3:+:22902491..22904137
Molecular Weight (calculated)
29587.0 Da
IEP (calculated)
9.818
GRAVY (calculated)
0.093
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTLHCLST LHLLPRTHHP KTLNSLKPIT TKSQPCKTPE IPSTPNALQL LKSSSLPLAV IALPFFLDPQ DAAAAGGEFG ILEGRSFALI HPIVMGGLFA
101: YTLWTGYLGW QWRRVRTIQS EISDLKKQLK PTPVSPDGST AVDSSSPPST TELQIQRLTE ERKELVKGSY RDKHFDAGSV LLGFGVLEAV FGGVNTYLRT
201: GKLFPGPHLY AGAGITVLWA AAAALVPAMQ KGNDTARSLH IALNAVNVLL FIWQIPTGLD IVLKVFEFTK WP
101: YTLWTGYLGW QWRRVRTIQS EISDLKKQLK PTPVSPDGST AVDSSSPPST TELQIQRLTE ERKELVKGSY RDKHFDAGSV LLGFGVLEAV FGGVNTYLRT
201: GKLFPGPHLY AGAGITVLWA AAAALVPAMQ KGNDTARSLH IALNAVNVLL FIWQIPTGLD IVLKVFEFTK WP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.