Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 4
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 4
- cytosol 2
- nucleus 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G14615.1 | Thale cress | extracellular, golgi | 73.68 | 73.68 |
| Bra039730.1-P | Field mustard | cytosol, extracellular | 75.0 | 70.37 |
| CDY53730 | Canola | cytosol, extracellular | 75.0 | 70.37 |
| CDY36878 | Canola | cytosol, extracellular | 73.68 | 69.14 |
| AT1G52825.1 | Thale cress | golgi | 69.74 | 67.95 |
| EER95956 | Sorghum | cytosol | 63.16 | 63.16 |
| VIT_05s0020g04550.t01 | Wine grape | cytosol, extracellular | 63.16 | 63.16 |
| GSMUA_Achr9P25570_001 | Banana | extracellular, golgi | 60.53 | 59.74 |
| Solyc09g083070.2.1 | Tomato | extracellular, golgi | 63.16 | 59.26 |
| TraesCS2D01G339300.1 | Wheat | cytosol | 59.21 | 59.21 |
| TraesCS2A01G323700.1 | Wheat | cytosol | 59.21 | 59.21 |
| Os07t0181800-01 | Rice | cytosol | 59.21 | 58.44 |
| TraesCS2B01G257700.1 | Wheat | cytosol | 57.89 | 57.89 |
| OQU88569 | Sorghum | cytosol | 50.0 | 55.88 |
| GSMUA_Achr10P... | Banana | extracellular | 52.63 | 51.28 |
| VIT_09s0070g00600.t01 | Wine grape | extracellular | 36.84 | 49.12 |
| Zm00001d007822_P001 | Maize | plastid | 63.16 | 37.21 |
| PGSC0003DMT400015635 | Potato | plasma membrane | 44.74 | 36.96 |
| VIT_00s0986g00010.t01 | Wine grape | cytosol, extracellular, mitochondrion, nucleus | 32.89 | 30.86 |
Protein Annotations
| EntrezGene:100500641 | MapMan:35.2 | EMBL:ACUP02000687 | EMBL:BT091585 | UniProt:C6T2C6 | EnsemblPlantsGene:GLYMA_02G001300 |
| GO:GO:0003674 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005635 | GO:GO:0005643 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006810 | GO:GO:0006913 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0017056 |
| GO:GO:0033617 | InterPro:IPR007230 | EnsemblPlants:KRH69060 | ProteinID:KRH69060 | ProteinID:KRH69060.1 | PFAM:PF09803 |
| PFscan:PS51434 | PANTHER:PTHR35700 | InterPro:Peptidase_S59 | InterPro:Pet100 | TMHMM:TMhelix | UniParc:UPI0001B15046 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:153893..156066
Molecular Weight (calculated)
8665.5 Da
IEP (calculated)
9.879
GRAVY (calculated)
-0.489
Length
76 amino acids
Sequence
(BLAST)
(BLAST)
1: MSSLGTSKGI LEIAKFGVYV TVPIILMYTF ANNPSNLRKF MGHRSYIEYP PEAEKPPSPE ELREMAREMA RKRNSS
1: MSSVGTSKGV LEIVKFGVYV AVPIVLMYTF ANNSTNIKKF MGNRSYVVYP EEAPRPPSPD ELREMARELA RKKNIR
Arabidopsis Description
At4g14615 [Source:UniProtKB/TrEMBL;Acc:Q8L9X5]
SUBAcon: [extracellular,golgi]
SUBAcon: [extracellular,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.