Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G339300.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS2B01G257700.1 | Wheat | cytosol | 98.68 | 98.68 |
| EER95956 | Sorghum | cytosol | 90.79 | 90.79 |
| Os07t0181800-01 | Rice | cytosol | 85.53 | 84.42 |
| OQU88569 | Sorghum | cytosol | 72.37 | 80.88 |
| GSMUA_Achr9P25570_001 | Banana | extracellular, golgi | 65.79 | 64.94 |
| AT4G14615.1 | Thale cress | extracellular, golgi | 63.16 | 63.16 |
| VIT_05s0020g04550.t01 | Wine grape | cytosol, extracellular | 61.84 | 61.84 |
| AT1G52825.1 | Thale cress | golgi | 63.16 | 61.54 |
| CDY53730 | Canola | cytosol, extracellular | 64.47 | 60.49 |
| Bra039730.1-P | Field mustard | cytosol, extracellular | 64.47 | 60.49 |
| CDY36878 | Canola | cytosol, extracellular | 63.16 | 59.26 |
| KRH69060 | Soybean | cytosol | 59.21 | 59.21 |
| Solyc09g083070.2.1 | Tomato | extracellular, golgi | 59.21 | 55.56 |
| GSMUA_Achr10P... | Banana | extracellular | 56.58 | 55.13 |
| Zm00001d007822_P001 | Maize | plastid | 90.79 | 53.49 |
| VIT_09s0070g00600.t01 | Wine grape | extracellular | 31.58 | 42.11 |
| VIT_00s0986g00010.t01 | Wine grape | cytosol, extracellular, mitochondrion, nucleus | 34.21 | 32.1 |
| PGSC0003DMT400015635 | Potato | plasma membrane | 36.84 | 30.43 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G323700.1 | EnsemblPlantsGene:TraesCS2A01G323700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0033617 | InterPro:Pet100 |
| PANTHER:PTHR35700 | PFAM:PF09803 | SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr2A:+:554011967..554019795
Molecular Weight (calculated)
8482.5 Da
IEP (calculated)
10.370
GRAVY (calculated)
-0.316
Length
76 amino acids
Sequence
(BLAST)
(BLAST)
1: MSSLGTSKGI LEIAKFGVYV AVPVTLTYLV ATDSKAIKKL MGLRPYVVYP PEGPRPPPPE ELRERAREIA RSRRQE
1: MSSVGTSKGV LEIVKFGVYV AVPIVLMYTF ANNSTNIKKF MGNRSYVVYP EEAPRPPSPD ELREMARELA RKKNIR
Arabidopsis Description
At4g14615 [Source:UniProtKB/TrEMBL;Acc:Q8L9X5]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.