Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- golgi 6
- endoplasmic reticulum 4
- cytosol 2
- plasma membrane 4
- vacuole 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G14615.1 | Thale cress | extracellular, golgi | 82.05 | 84.21 |
| Bra039730.1-P | Field mustard | cytosol, extracellular | 82.05 | 79.01 |
| CDY53730 | Canola | cytosol, extracellular | 82.05 | 79.01 |
| CDY36878 | Canola | cytosol, extracellular | 80.77 | 77.78 |
| KRH69060 | Soybean | cytosol | 67.95 | 69.74 |
| VIT_05s0020g04550.t01 | Wine grape | cytosol, extracellular | 61.54 | 63.16 |
| TraesCS2D01G339300.1 | Wheat | cytosol | 61.54 | 63.16 |
| TraesCS2A01G323700.1 | Wheat | cytosol | 61.54 | 63.16 |
| EER95956 | Sorghum | cytosol | 60.26 | 61.84 |
| TraesCS2B01G257700.1 | Wheat | cytosol | 60.26 | 61.84 |
| GSMUA_Achr9P25570_001 | Banana | extracellular, golgi | 60.26 | 61.04 |
| Os07t0181800-01 | Rice | cytosol | 58.97 | 59.74 |
| Solyc09g083070.2.1 | Tomato | extracellular, golgi | 60.26 | 58.02 |
| OQU88569 | Sorghum | cytosol | 48.72 | 55.88 |
| GSMUA_Achr10P... | Banana | extracellular | 47.44 | 47.44 |
| VIT_09s0070g00600.t01 | Wine grape | extracellular | 34.62 | 47.37 |
| Zm00001d007822_P001 | Maize | plastid | 60.26 | 36.43 |
| PGSC0003DMT400015635 | Potato | plasma membrane | 41.03 | 34.78 |
| VIT_00s0986g00010.t01 | Wine grape | cytosol, extracellular, mitochondrion, nucleus | 34.62 | 33.33 |
Protein Annotations
| MapMan:35.2 | EntrezGene:841716 | UniProt:A0A178W9E8 | ProteinID:AEE32856.1 | EMBL:AK117948 | ProteinID:ANM60148.1 |
| ArrayExpress:AT1G52825 | EnsemblPlantsGene:AT1G52825 | RefSeq:AT1G52825 | TAIR:AT1G52825 | RefSeq:AT1G52825-TAIR-G | EnsemblPlants:AT1G52825.1 |
| TAIR:AT1G52825.1 | EMBL:BT004663 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0033617 | RefSeq:NP_001319209.1 | RefSeq:NP_849801.1 | ProteinID:OAP14978.1 | PFAM:PF09803 | PO:PO:0000293 |
| PANTHER:PTHR35700 | InterPro:Pet100 | UniProt:Q8GXZ7 | TMHMM:TMhelix | UniParc:UPI000000C412 | : |
Description
At1g52821 [Source:UniProtKB/TrEMBL;Acc:Q8GXZ7]
Coordinates
chr1:-:19670395..19671059
Molecular Weight (calculated)
8714.8 Da
IEP (calculated)
10.471
GRAVY (calculated)
-0.205
Length
78 amino acids
Sequence
(BLAST)
(BLAST)
1: MSSVGTSKGI LEIAKFGVYV AVPIVLIYTF ANNSTNIKKF MGNHSYVVYP KEAPRPPSPE ELREMAKQLA LKKKKNPF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.