Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 4
- vacuole 4
- plastid 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P25570_001 | Banana | extracellular, golgi | 67.95 | 68.83 |
| EER95956 | Sorghum | cytosol | 60.26 | 61.84 |
| Os07t0181800-01 | Rice | cytosol | 60.26 | 61.04 |
| TraesCS2D01G339300.1 | Wheat | cytosol | 55.13 | 56.58 |
| TraesCS2B01G257700.1 | Wheat | cytosol | 55.13 | 56.58 |
| TraesCS2A01G323700.1 | Wheat | cytosol | 55.13 | 56.58 |
| OQU88569 | Sorghum | cytosol | 46.15 | 52.94 |
| KRH69060 | Soybean | cytosol | 51.28 | 52.63 |
| AT4G14615.1 | Thale cress | extracellular, golgi | 50.0 | 51.32 |
| VIT_05s0020g04550.t01 | Wine grape | cytosol, extracellular | 48.72 | 50.0 |
| CDY53730 | Canola | cytosol, extracellular | 50.0 | 48.15 |
| CDY36878 | Canola | cytosol, extracellular | 50.0 | 48.15 |
| Bra039730.1-P | Field mustard | cytosol, extracellular | 50.0 | 48.15 |
| AT1G52825.1 | Thale cress | golgi | 47.44 | 47.44 |
| Solyc09g083070.2.1 | Tomato | extracellular, golgi | 48.72 | 46.91 |
| Zm00001d007822_P001 | Maize | plastid | 60.26 | 36.43 |
| VIT_09s0070g00600.t01 | Wine grape | extracellular | 21.79 | 29.82 |
| PGSC0003DMT400015635 | Potato | plasma membrane | 29.49 | 25.0 |
| VIT_00s0986g00010.t01 | Wine grape | cytosol, extracellular, mitochondrion, nucleus | 21.79 | 20.99 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P08640_001 | EnsemblPlants:GSMUA_Achr10T08640_001 | EnsemblPlantsGene:GSMUA_Achr10G08640_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR35700 | TMHMM:TMhelix | UniParc:UPI0002964BC6 | UniProt:M0RGJ0 | MapMan:35.2 | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G08640_001]
Coordinates
chr10:-:18542872..18544644
Molecular Weight (calculated)
8524.3 Da
IEP (calculated)
8.940
GRAVY (calculated)
-0.124
Length
78 amino acids
Sequence
(BLAST)
(BLAST)
1: MSSLGASGGW LLELGKFAAY LTVPAAVTFA IATDSKTTLY KLMGFRSYVV YPPEGPRPPS LEELREMAPE IRQKSNSQ
1: MSSVGTSKGV LEIVKFGVYV AVPIVLMYTF ANNSTNIKKF MGNRSYVVYP EEAPRPPSPD ELREMARELA RKKNIR
Arabidopsis Description
At4g14615 [Source:UniProtKB/TrEMBL;Acc:Q8L9X5]
SUBAcon: [extracellular,golgi]
SUBAcon: [extracellular,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.