Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 2
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0181800-01 | Rice | cytosol | 93.42 | 92.21 |
| TraesCS2D01G339300.1 | Wheat | cytosol | 90.79 | 90.79 |
| TraesCS2A01G323700.1 | Wheat | cytosol | 90.79 | 90.79 |
| OQU88569 | Sorghum | cytosol | 80.26 | 89.71 |
| TraesCS2B01G257700.1 | Wheat | cytosol | 89.47 | 89.47 |
| GSMUA_Achr9P25570_001 | Banana | extracellular, golgi | 69.74 | 68.83 |
| VIT_05s0020g04550.t01 | Wine grape | cytosol, extracellular | 64.47 | 64.47 |
| KRH69060 | Soybean | cytosol | 63.16 | 63.16 |
| AT4G14615.1 | Thale cress | extracellular, golgi | 61.84 | 61.84 |
| GSMUA_Achr10P... | Banana | extracellular | 61.84 | 60.26 |
| AT1G52825.1 | Thale cress | golgi | 61.84 | 60.26 |
| Solyc09g083070.2.1 | Tomato | extracellular, golgi | 63.16 | 59.26 |
| CDY53730 | Canola | cytosol, extracellular | 63.16 | 59.26 |
| Bra039730.1-P | Field mustard | cytosol, extracellular | 63.16 | 59.26 |
| Zm00001d007822_P001 | Maize | plastid | 100.0 | 58.91 |
| CDY36878 | Canola | cytosol, extracellular | 61.84 | 58.02 |
| VIT_09s0070g00600.t01 | Wine grape | extracellular | 34.21 | 45.61 |
| PGSC0003DMT400015635 | Potato | plasma membrane | 40.79 | 33.7 |
| VIT_00s0986g00010.t01 | Wine grape | cytosol, extracellular, mitochondrion, nucleus | 35.53 | 33.33 |
Protein Annotations
| MapMan:35.2 | EntrezGene:8060748 | UniProt:C5XB33 | EnsemblPlants:EER95956 | ProteinID:EER95956 | ProteinID:EER95956.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0033617 | PFAM:PF09803 |
| PANTHER:PTHR35700 | InterPro:Pet100 | EnsemblPlantsGene:SORBI_3002G055100 | unigene:Sbi.7465 | TMHMM:TMhelix | UniParc:UPI00017B6645 |
| RefSeq:XP_002459435.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:5260716..5262563
Molecular Weight (calculated)
8469.5 Da
IEP (calculated)
10.515
GRAVY (calculated)
-0.351
Length
76 amino acids
Sequence
(BLAST)
(BLAST)
1: MSSLGTSKGI LEIAKFGVYV SVPVALTYLV ATDSKTLKKL MGLRPYVVYP PEGPRPPPPE ELRERAREIA RKRQQS
1: MSSVGTSKGV LEIVKFGVYV AVPIVLMYTF ANNSTNIKKF MGNRSYVVYP EEAPRPPSPD ELREMARELA RKKNIR
Arabidopsis Description
At4g14615 [Source:UniProtKB/TrEMBL;Acc:Q8L9X5]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.