Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- golgi 5
- extracellular 5
- vacuole 3
- plasma membrane 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36878 | Canola | cytosol, extracellular | 92.11 | 86.42 |
| Bra039730.1-P | Field mustard | cytosol, extracellular | 90.79 | 85.19 |
| CDY53730 | Canola | cytosol, extracellular | 90.79 | 85.19 |
| AT1G52825.1 | Thale cress | golgi | 84.21 | 82.05 |
| KRH69060 | Soybean | cytosol | 73.68 | 73.68 |
| VIT_05s0020g04550.t01 | Wine grape | cytosol, extracellular | 68.42 | 68.42 |
| GSMUA_Achr9P25570_001 | Banana | extracellular, golgi | 64.47 | 63.64 |
| TraesCS2D01G339300.1 | Wheat | cytosol | 63.16 | 63.16 |
| TraesCS2B01G257700.1 | Wheat | cytosol | 63.16 | 63.16 |
| TraesCS2A01G323700.1 | Wheat | cytosol | 63.16 | 63.16 |
| Os07t0181800-01 | Rice | cytosol | 63.16 | 62.34 |
| EER95956 | Sorghum | cytosol | 61.84 | 61.84 |
| Solyc09g083070.2.1 | Tomato | extracellular, golgi | 65.79 | 61.73 |
| OQU88569 | Sorghum | cytosol | 47.37 | 52.94 |
| GSMUA_Achr10P... | Banana | extracellular | 51.32 | 50.0 |
| VIT_09s0070g00600.t01 | Wine grape | extracellular | 35.53 | 47.37 |
| PGSC0003DMT400015635 | Potato | plasma membrane | 46.05 | 38.04 |
| Zm00001d007822_P001 | Maize | plastid | 61.84 | 36.43 |
| VIT_00s0986g00010.t01 | Wine grape | cytosol, extracellular, mitochondrion, nucleus | 34.21 | 32.1 |
Protein Annotations
| MapMan:35.2 | EntrezGene:827111 | ProteinID:AEE83466.1 | EMBL:AK117906 | ArrayExpress:AT4G14615 | EnsemblPlantsGene:AT4G14615 |
| RefSeq:AT4G14615 | TAIR:AT4G14615 | RefSeq:AT4G14615-TAIR-G | EnsemblPlants:AT4G14615.1 | TAIR:AT4G14615.1 | EMBL:AY088160 |
| EMBL:BT024527 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0033617 |
| RefSeq:NP_567436.1 | PFAM:PF09803 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR35700 | InterPro:Pet100 | UniProt:Q8L9X5 | TMHMM:TMhelix | UniParc:UPI00000AC28D | : |
Description
At4g14615 [Source:UniProtKB/TrEMBL;Acc:Q8L9X5]
Coordinates
chr4:+:8383727..8385249
Molecular Weight (calculated)
8593.5 Da
IEP (calculated)
10.318
GRAVY (calculated)
-0.259
Length
76 amino acids
Sequence
(BLAST)
(BLAST)
1: MSSVGTSKGV LEIVKFGVYV AVPIVLMYTF ANNSTNIKKF MGNRSYVVYP EEAPRPPSPD ELREMARELA RKKNIR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.