Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 1
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039730.1-P | Field mustard | cytosol, extracellular | 100.0 | 100.0 |
| CDY36878 | Canola | cytosol, extracellular | 98.77 | 98.77 |
| AT4G14615.1 | Thale cress | extracellular, golgi | 85.19 | 90.79 |
| AT1G52825.1 | Thale cress | golgi | 79.01 | 82.05 |
| KRH69060 | Soybean | cytosol | 70.37 | 75.0 |
| VIT_05s0020g04550.t01 | Wine grape | cytosol, extracellular | 65.43 | 69.74 |
| TraesCS2D01G339300.1 | Wheat | cytosol | 60.49 | 64.47 |
| TraesCS2A01G323700.1 | Wheat | cytosol | 60.49 | 64.47 |
| EER95956 | Sorghum | cytosol | 59.26 | 63.16 |
| TraesCS2B01G257700.1 | Wheat | cytosol | 59.26 | 63.16 |
| GSMUA_Achr9P25570_001 | Banana | extracellular, golgi | 59.26 | 62.34 |
| Os07t0181800-01 | Rice | cytosol | 58.02 | 61.04 |
| Solyc09g083070.2.1 | Tomato | extracellular, golgi | 59.26 | 59.26 |
| OQU88569 | Sorghum | cytosol | 45.68 | 54.41 |
| GSMUA_Achr10P... | Banana | extracellular | 48.15 | 50.0 |
| VIT_09s0070g00600.t01 | Wine grape | extracellular | 34.57 | 49.12 |
| Zm00001d007822_P001 | Maize | plastid | 59.26 | 37.21 |
| PGSC0003DMT400015635 | Potato | plasma membrane | 39.51 | 34.78 |
| VIT_00s0986g00010.t01 | Wine grape | cytosol, extracellular, mitochondrion, nucleus | 33.33 | 33.33 |
Protein Annotations
| MapMan:35.2 | GO:A0A078IRP2 | UniProt:A0A078IRP2 | EnsemblPlants:CDY53730 | ProteinID:CDY53730 | ProteinID:CDY53730.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0033617 | EnsemblPlantsGene:GSBRNA2T00011314001 |
| PFAM:PF09803 | PANTHER:PTHR35700 | InterPro:Pet100 | TMHMM:TMhelix | UniParc:UPI00025459F0 | SEG:seg |
Description
BnaA08g30140DBnaA08g30140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRP2]
Coordinates
chrLK033232:-:51654..54134
Molecular Weight (calculated)
9079.0 Da
IEP (calculated)
9.822
GRAVY (calculated)
-0.383
Length
81 amino acids
Sequence
(BLAST)
(BLAST)
1: MSAVGTSKGI LEIAKFGFYV AVPIGLMYTF ANNSTNIKKF MGNRSYVVYP EEAPRPPSPE ELREMARELA RKKNIHGVDD K
1: MSSVGTSKGV LEIVKFGVYV AVPIVLMYTF ANNSTNIKKF MGNRSYVVYP EEAPRPPSPD ELREMARELA RKKNIR
Arabidopsis Description
At4g14615 [Source:UniProtKB/TrEMBL;Acc:Q8L9X5]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.