CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
mitochondrion 3
cytosol 2
nucleus 1
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, nucleus, peroxisome, plasma membrane, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95956	Sorghum	cytosol	89.71	80.26
Os07t0181800-01	Rice	cytosol	83.82	74.03
TraesCS2D01G339300.1	Wheat	cytosol	80.88	72.37
TraesCS2A01G323700.1	Wheat	cytosol	80.88	72.37
TraesCS2B01G257700.1	Wheat	cytosol	79.41	71.05
GSMUA_Achr9P25570_001	Banana	extracellular, golgi	57.35	50.65
VIT_05s0020g04550.t01	Wine grape	cytosol, extracellular	55.88	50.0
KRH69060	Soybean	cytosol	55.88	50.0
AT1G52825.1	Thale cress	golgi	55.88	48.72
AT4G14615.1	Thale cress	extracellular, golgi	52.94	47.37
Zm00001d007822_P001	Maize	plastid	89.71	47.29
Solyc09g083070.2.1	Tomato	extracellular, golgi	55.88	46.91
GSMUA_Achr10P...	Banana	extracellular	52.94	46.15
CDY53730	Canola	cytosol, extracellular	54.41	45.68
Bra039730.1-P	Field mustard	cytosol, extracellular	54.41	45.68
CDY36878	Canola	cytosol, extracellular	52.94	44.44
VIT_09s0070g00600.t01	Wine grape	extracellular	35.29	42.11
VIT_00s0986g00010.t01	Wine grape	cytosol, extracellular, mitochondrion, nucleus	36.76	30.86
PGSC0003DMT400015635	Potato	plasma membrane	38.24	28.26

Protein Annotations

EnsemblPlants:OQU88569	EnsemblPlantsGene:SORBI_3002G054901	PANTHER:PTHR35700	ProteinID:OQU88569	ProteinID:OQU88569.1	RefSeq:XP_002459433.1
SEG:seg	UniParc:UPI0001A83013	UniProt:A0A1W0W2D8	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr2:+:5252553..5253858

Molecular Weight (calculated)

7359.0 Da

IEP (calculated)

10.113

GRAVY (calculated)

-0.253

Length

68 amino acids

Sequence
(BLAST)

1: MSSLGTSKGI LENAKFGVYG SVPVALTYLV ATGSKDLKKL MGLVGPRPPP PEELCERAWE IARKRQQS

Best Arabidopsis Sequence Match ( AT4G14615.1 )
(BLAST)

1: MSSVGTSKGV LEIVKFGVYV AVPIVLMYTF ANNSTNIKKF MGNRSYVVYP EEAPRPPSPD ELREMARELA RKKNIR

Arabidopsis Description

At4g14615 [Source:UniProtKB/TrEMBL;Acc:Q8L9X5]
SUBAcon: [extracellular,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.