Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- plastid 3
- cytosol 1
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0986g00010.t01 | Wine grape | cytosol, extracellular, mitochondrion, nucleus | 75.44 | 53.09 |
| VIT_05s0020g04550.t01 | Wine grape | cytosol, extracellular | 68.42 | 51.32 |
| KRH69060 | Soybean | cytosol | 49.12 | 36.84 |
| Solyc09g083070.2.1 | Tomato | extracellular, golgi | 50.88 | 35.8 |
| AT4G14615.1 | Thale cress | extracellular, golgi | 47.37 | 35.53 |
| OQU88569 | Sorghum | cytosol | 42.11 | 35.29 |
| AT1G52825.1 | Thale cress | golgi | 47.37 | 34.62 |
| CDY53730 | Canola | cytosol, extracellular | 49.12 | 34.57 |
| CDY36878 | Canola | cytosol, extracellular | 49.12 | 34.57 |
| Bra039730.1-P | Field mustard | cytosol, extracellular | 49.12 | 34.57 |
| EER95956 | Sorghum | cytosol | 45.61 | 34.21 |
| Os07t0181800-01 | Rice | cytosol | 43.86 | 32.47 |
| TraesCS2A01G323700.1 | Wheat | cytosol | 42.11 | 31.58 |
| TraesCS2B01G257700.1 | Wheat | cytosol | 42.11 | 31.58 |
| TraesCS2D01G339300.1 | Wheat | cytosol | 42.11 | 31.58 |
| PGSC0003DMT400015635 | Potato | plasma membrane | 49.12 | 30.43 |
| GSMUA_Achr9P25570_001 | Banana | extracellular, golgi | 38.6 | 28.57 |
| GSMUA_Achr10P... | Banana | extracellular | 29.82 | 21.79 |
| Zm00001d007822_P001 | Maize | plastid | 45.61 | 20.16 |
Protein Annotations
| EntrezGene:100855137 | wikigene:100855137 | MapMan:35.2 | ProteinID:CCB61459 | ProteinID:CCB61459.1 | UniProt:F6I3E1 |
| EMBL:FN596740 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0033617 | EntrezGene:LOC100855137 | wikigene:LOC100855137 |
| PFAM:PF09803 | PANTHER:PTHR35700 | InterPro:Pet100 | UniParc:UPI000210A849 | ArrayExpress:VIT_09s0070g00600 | EnsemblPlantsGene:VIT_09s0070g00600 |
| EnsemblPlants:VIT_09s0070g00600.t01 | RefSeq:XP_003632905 | RefSeq:XP_003632905.1 | : | : | : |
Description
No Description!
Coordinates
chr9:+:14042696..14049072
Molecular Weight (calculated)
6170.7 Da
IEP (calculated)
8.032
GRAVY (calculated)
0.240
Length
57 amino acids
Sequence
(BLAST)
(BLAST)
1: MSSIGTSKGI LEIGKFAFYV SIPIDLMYTL ANNSENMKKL VQKDCGLCCM GWGMSGS
1: MSSVGTSKGI LEIAKFGVYV AVPIVLIYTF ANNSTNIKKF MGNHSYVVYP KEAPRPPSPE ELREMAKQLA LKKKKNPF
Arabidopsis Description
At1g52821 [Source:UniProtKB/TrEMBL;Acc:Q8GXZ7]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.