CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, endoplasmic reticulum

Predictor Summary:

extracellular 4
golgi 4
plasma membrane 6
endoplasmic reticulum 5
vacuole 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27711	Soybean	endoplasmic reticulum, plasma membrane	97.72	97.72
VIT_08s0007g01760.t01	Wine grape	endoplasmic reticulum	66.16	67.7
PGSC0003DMT400052432	Potato	endoplasmic reticulum, plasma membrane	64.64	65.64
Bra017142.1-P	Field mustard	endoplasmic reticulum, plastid	50.57	64.56
Solyc09g013070.2.1	Tomato	endoplasmic reticulum, extracellular	31.94	64.12
CDY18409	Canola	cytosol, endoplasmic reticulum, plasma membrane	62.36	62.6
CDX93333	Canola	cytosol, endoplasmic reticulum, plasma membrane	61.98	62.45
AT2G38050.1	Thale cress	endoplasmic reticulum	60.08	60.31
PGSC0003DMT400049423	Potato	endoplasmic reticulum, plastid	52.47	57.74
Solyc10g086500.1.1	Tomato	extracellular, plasma membrane	55.89	57.2
GSMUA_Achr4P11670_001	Banana	plasma membrane	55.89	55.26
TraesCS3D01G359100.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	49.05	48.5
OQU87873	Sorghum	plasma membrane	48.67	48.48
Zm00001d042843_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	48.29	48.47
TraesCS3B01G397800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	48.29	47.21
TraesCS3A01G366000.1	Wheat	plasma membrane	48.29	47.04
HORVU3Hr1G085400.1	Barley	plasma membrane	48.29	46.86
Os01t0851600-01	Rice	endoplasmic reticulum, golgi	47.15	46.27
Os11t0184100-01	Rice	endoplasmic reticulum, plasma membrane, plastid	45.25	43.75
KRH70288	Soybean	mitochondrion	23.19	22.93
KRH70289	Soybean	endoplasmic reticulum, plasma membrane	22.43	22.18

Protein Annotations

KEGG:00140+1.3.1.22	KEGG:00905+1.3.1.22	Gene3D:1.20.120.1630	EntrezGene:100797871	MapMan:11.3.1.3	InterPro:3-oxo-5-alpha-steroid_4-DH
InterPro:3-oxo-5_a-steroid_4-DH_C	EMBL:ACUP02004349	EnsemblPlantsGene:GLYMA_07G144400	GO:GO:0003674	GO:GO:0003824	GO:GO:0003865
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0008202	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016132
GO:GO:0016627	GO:GO:0055114	UniProt:I1KK99	InterPro:IPR001104	EnsemblPlants:KRH49269	ProteinID:KRH49269
ProteinID:KRH49269.1	PFAM:PF02544	PIRSF:PIRSF015596	PFscan:PS50244	PANTHER:PTHR10556	PANTHER:PTHR10556:SF37
MetaCyc:PWY-6032	MetaCyc:PWY-7455	TMHMM:TMhelix	UniParc:UPI000233869B	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:17208947..17209738

Molecular Weight (calculated)

30231.0 Da

IEP (calculated)

9.643

GRAVY (calculated)

0.210

Length

263 amino acids

Sequence
(BLAST)

001: MIPEHYSDSS LFHSSLLTLF LIAPPTFLSL TFLQAPYGKH HRPGWGPNLP PPLAWLLMES PTLWLTLLLF PLGLHSHNPK AQALITPFLI HYFNRTILYP
101: LHLLLTPSKK TTPGFPLSVA LMAFAFNVLN SYLQARTVSH YNNHYDDSGF FWFRFLCGLL VFLLGMGINV WADRVLLRLK SEGKGYVVPR GGLFELVACP
201: NYFGEIVEWL GWAVMTWSWA GLGFFVYTFA NLGPRARANR RWYLEKFGED YPKERKAVIP YLY

Best Arabidopsis Sequence Match ( AT2G38050.1 )
(BLAST)

001: MEEIADKTFF RYCLLTLIFA GPPTAVLLKF LQAPYGKHNR TGWGPTVSPP IAWFVMESPT LWLTLLLFPF GRHALNPKSL LLFSPYLIHY FHRTIIYPLR
101: LFRSSFPAGK NGFPITIAAL AFTFNLLNGY IQARWVSHYK DDYEDGNWFW WRFVIGMVVF ITGMYINITS DRTLVRLKKE NRGGYVIPRG GWFELVSCPN
201: YFGEAIEWLG WAVMTWSWAG IGFFLYTCSN LFPRARASHK WYIAKFKEEY PKTRKAVIPF VY

Arabidopsis Description

DET2Steroid 5-alpha-reductase DET2 [Source:UniProtKB/Swiss-Prot;Acc:Q38944]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.