Factsheet for TraesCS3B01G397800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, endoplasmic reticulum, plastid

Predictor Summary:

extracellular 2
golgi 2
plasma membrane 3
endoplasmic reticulum 3
vacuole 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G366000.1	Wheat	plasma membrane	91.08	90.74
HORVU3Hr1G085400.1	Barley	plasma membrane	90.33	89.67
TraesCS3D01G359100.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	86.99	87.97
Os01t0851600-01	Rice	endoplasmic reticulum, golgi	73.61	73.88
OQU87873	Sorghum	plasma membrane	71.75	73.11
Zm00001d042843_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	70.63	72.52
Os11t0184100-01	Rice	endoplasmic reticulum, plasma membrane, plastid	66.54	65.81
GSMUA_Achr4P11670_001	Banana	plasma membrane	50.19	50.75
KRH27711	Soybean	endoplasmic reticulum, plasma membrane	47.58	48.67
VIT_08s0007g01760.t01	Wine grape	endoplasmic reticulum	46.47	48.64
Bra017142.1-P	Field mustard	endoplasmic reticulum, plastid	37.17	48.54
KRH49269	Soybean	endoplasmic reticulum, plasma membrane	47.21	48.29
PGSC0003DMT400052432	Potato	endoplasmic reticulum, plasma membrane	46.47	48.26
PGSC0003DMT400049423	Potato	endoplasmic reticulum, plastid	41.64	46.86
CDY18409	Canola	cytosol, endoplasmic reticulum, plasma membrane	44.98	46.18
CDX93333	Canola	cytosol, endoplasmic reticulum, plasma membrane	44.24	45.59
AT2G38050.1	Thale cress	endoplasmic reticulum	43.87	45.04
Solyc09g013070.2.1	Tomato	endoplasmic reticulum, extracellular	21.56	44.27
Solyc10g086500.1.1	Tomato	extracellular, plasma membrane	41.64	43.58
TraesCS2B01G269300.1	Wheat	mitochondrion	21.56	20.07

Protein Annotations

KEGG:00140+1.3.1.22	KEGG:00905+1.3.1.22	MapMan:11.3.1.3	InterPro:3-oxo-5-alpha-steroid_4-DH	InterPro:3-oxo-5_a-steroid_4-DH_C	GO:GO:0003674
GO:GO:0003824	GO:GO:0003865	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008202	GO:GO:0016020	GO:GO:0016021
GO:GO:0016627	GO:GO:0055114	InterPro:IPR001104	PFAM:PF02544	PIRSF:PIRSF015596	PFscan:PS50244
PANTHER:PTHR10556	PANTHER:PTHR10556:SF37	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G397800	EnsemblPlants:TraesCS3B01G397800.1	SEG:seg

Description

No Description!

Coordinates

chr3B:+:628101834..628102643

Molecular Weight (calculated)

29126.8 Da

IEP (calculated)

9.853

GRAVY (calculated)

0.440

Length

269 amino acids

Sequence
(BLAST)

001: MSDQAAGAGG GDALFSRCLL ALYVISPVTV FLLRFVSAPY GKLSRPGWGP AIPAALAWCA MESPTLWLPP LVSPLPLLLA AAAASGSPLA ALPTALYALH
101: YVNRTVLHPL RILRLRRAAA PVPVLVAACG FGFNLLNAYV QARSWALHAG RPASAFALAR CLAGLALFAW GMRVNVAADK ELLRLKEAGG GYKIPRGGWF
201: DAVTCPNYFG EIVEWLGYCL VAWSPASWAF FLYTCANLMP RARDHRQWYL NKFGGEYPAS RKAVIPYIY

Best Arabidopsis Sequence Match ( AT2G38050.1 )
(BLAST)

001: MEEIADKTFF RYCLLTLIFA GPPTAVLLKF LQAPYGKHNR TGWGPTVSPP IAWFVMESPT LWLTLLLFPF GRHALNPKSL LLFSPYLIHY FHRTIIYPLR
101: LFRSSFPAGK NGFPITIAAL AFTFNLLNGY IQARWVSHYK DDYEDGNWFW WRFVIGMVVF ITGMYINITS DRTLVRLKKE NRGGYVIPRG GWFELVSCPN
201: YFGEAIEWLG WAVMTWSWAG IGFFLYTCSN LFPRARASHK WYIAKFKEEY PKTRKAVIPF VY

Arabidopsis Description

DET2Steroid 5-alpha-reductase DET2 [Source:UniProtKB/Swiss-Prot;Acc:Q38944]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.