Factsheet for Zm00001d042843_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 3
golgi 3
plasma membrane 4
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87873	Sorghum	plasma membrane	87.79	87.12
TraesCS3D01G359100.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	72.9	71.8
TraesCS3B01G397800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	72.52	70.63
Os01t0851600-01	Rice	endoplasmic reticulum, golgi	72.14	70.52
HORVU3Hr1G085400.1	Barley	plasma membrane	72.52	70.11
TraesCS3A01G366000.1	Wheat	plasma membrane	71.76	69.63
Os11t0184100-01	Rice	endoplasmic reticulum, plasma membrane, plastid	69.08	66.54
GSMUA_Achr4P11670_001	Banana	plasma membrane	51.91	51.13
KRH27711	Soybean	endoplasmic reticulum, plasma membrane	48.85	48.67
KRH49269	Soybean	endoplasmic reticulum, plasma membrane	48.47	48.29
VIT_08s0007g01760.t01	Wine grape	endoplasmic reticulum	47.33	48.25
CDY18409	Canola	cytosol, endoplasmic reticulum, plasma membrane	47.71	47.71
Bra017142.1-P	Field mustard	endoplasmic reticulum, plastid	37.02	47.09
CDX93333	Canola	cytosol, endoplasmic reticulum, plasma membrane	46.56	46.74
AT2G38050.1	Thale cress	endoplasmic reticulum	46.18	46.18
PGSC0003DMT400049423	Potato	endoplasmic reticulum, plastid	41.6	45.61
PGSC0003DMT400052432	Potato	endoplasmic reticulum, plasma membrane	45.04	45.56
Solyc09g013070.2.1	Tomato	endoplasmic reticulum, extracellular	22.14	44.27
Solyc10g086500.1.1	Tomato	extracellular, plasma membrane	41.98	42.8
Zm00001d018846_P001	Maize	peroxisome, plastid, vacuole	24.43	25.3
Zm00001d018847_P001	Maize	endoplasmic reticulum, vacuole	26.34	25.0
Zm00001d007910_P001	Maize	plasma membrane	23.66	21.91

Protein Annotations

KEGG:00140+1.3.1.22	KEGG:00905+1.3.1.22	EntrezGene:100283443	MapMan:11.3.1.3	InterPro:3-oxo-5-alpha-steroid_4-DH	InterPro:3-oxo-5_a-steroid_4-DH_C
UniProt:B6TIF9	EMBL:EU964774	GO:GO:0003674	GO:GO:0003824	GO:GO:0003865	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0008202	GO:GO:0009058	GO:GO:0009917	GO:GO:0010268	GO:GO:0016020	GO:GO:0016021
GO:GO:0016132	GO:GO:0016627	GO:GO:0050213	GO:GO:0055114	InterPro:IPR001104	ProteinID:ONM36388.1
PFAM:PF02544	PIRSF:PIRSF015596	PFscan:PS50244	PANTHER:PTHR10556	PANTHER:PTHR10556:SF37	TMHMM:TMhelix
UniParc:UPI000182DA00	EnsemblPlantsGene:Zm00001d042843	EnsemblPlants:Zm00001d042843_P001	EnsemblPlants:Zm00001d042843_T001	SEG:seg	:

Description

nana plant1 nana plant1

Coordinates

chr3:-:181821465..181822989

Molecular Weight (calculated)

29015.7 Da

IEP (calculated)

10.528

GRAVY (calculated)

0.282

Length

262 amino acids

Sequence
(BLAST)

001: MPDQTSAAAA GGAAFDRCLL ALYLISPLTV LALRFISAPY GKLSRPGWGP VLPAPLAWFL MESPTLWLPP LVLLRWPPPP LSGPLAALPA ALYAFHYVHR
101: TLVHPLRLAR LRRAPAPVPL LIAACALGFN ILNAYLQARS FALHAGRQAS PFRCLAGLAL FAWGMRTNIA ADKELLRLKE AGGGYKIPRG GWFDLVTSPN
201: YFGETVEWLG FAVVAWTPAA WAFFLYTCAN LGPRARDHRR WYVQKFRGEY PASRKAFIPY IY

Best Arabidopsis Sequence Match ( AT2G38050.1 )
(BLAST)

001: MEEIADKTFF RYCLLTLIFA GPPTAVLLKF LQAPYGKHNR TGWGPTVSPP IAWFVMESPT LWLTLLLFPF GRHALNPKSL LLFSPYLIHY FHRTIIYPLR
101: LFRSSFPAGK NGFPITIAAL AFTFNLLNGY IQARWVSHYK DDYEDGNWFW WRFVIGMVVF ITGMYINITS DRTLVRLKKE NRGGYVIPRG GWFELVSCPN
201: YFGEAIEWLG WAVMTWSWAG IGFFLYTCSN LFPRARASHK WYIAKFKEEY PKTRKAVIPF VY

Arabidopsis Description

DET2Steroid 5-alpha-reductase DET2 [Source:UniProtKB/Swiss-Prot;Acc:Q38944]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.