CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 2
golgi 2
plasma membrane 4
endoplasmic reticulum 3
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042843_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	87.12	87.79
TraesCS3D01G359100.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	78.41	77.82
HORVU3Hr1G085400.1	Barley	plasma membrane	73.86	71.96
TraesCS3B01G397800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	73.11	71.75
Os01t0851600-01	Rice	endoplasmic reticulum, golgi	72.35	71.27
TraesCS3A01G366000.1	Wheat	plasma membrane	72.35	70.74
Os11t0184100-01	Rice	endoplasmic reticulum, plasma membrane, plastid	69.32	67.28
GSMUA_Achr4P11670_001	Banana	plasma membrane	52.65	52.26
VIT_08s0007g01760.t01	Wine grape	endoplasmic reticulum	47.73	49.03
KRH49269	Soybean	endoplasmic reticulum, plasma membrane	48.48	48.67
CDY18409	Canola	cytosol, endoplasmic reticulum, plasma membrane	48.11	48.47
KRH27711	Soybean	endoplasmic reticulum, plasma membrane	48.11	48.29
Bra017142.1-P	Field mustard	endoplasmic reticulum, plastid	37.12	47.57
CDX93333	Canola	cytosol, endoplasmic reticulum, plasma membrane	46.97	47.51
PGSC0003DMT400052432	Potato	endoplasmic reticulum, plasma membrane	46.21	47.1
AT2G38050.1	Thale cress	endoplasmic reticulum	46.59	46.95
PGSC0003DMT400049423	Potato	endoplasmic reticulum, plastid	42.05	46.44
Solyc09g013070.2.1	Tomato	endoplasmic reticulum, extracellular	21.97	44.27
Solyc10g086500.1.1	Tomato	extracellular, plasma membrane	42.8	43.97
EER98015	Sorghum	endoplasmic reticulum, plasma membrane	26.89	24.83

Protein Annotations

KEGG:00140+1.3.1.22	KEGG:00905+1.3.1.22	MapMan:11.3.1.3	InterPro:3-oxo-5-alpha-steroid_4-DH	InterPro:3-oxo-5_a-steroid_4-DH_C	EntrezGene:8058917
ProteinID:AEW49992.1	UniProt:C5XPU8	ProteinID:EES03890.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0003865
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0008202	GO:GO:0009058	GO:GO:0009917	GO:GO:0010268	GO:GO:0016020
GO:GO:0016021	GO:GO:0016132	GO:GO:0016627	GO:GO:0050213	GO:GO:0055114	InterPro:IPR001104
EnsemblPlants:OQU87873	ProteinID:OQU87873	ProteinID:OQU87873.1	PFAM:PF02544	PIRSF:PIRSF015596	PFscan:PS50244
PANTHER:PTHR10556	PANTHER:PTHR10556:SF37	MetaCyc:PWY-6032	MetaCyc:PWY-7455	EnsemblPlantsGene:SORBI_3003G358400	TMHMM:TMhelix
UniParc:UPI000243D85C	RefSeq:XP_002456645.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:67621228..67632849

Molecular Weight (calculated)

28898.5 Da

IEP (calculated)

10.214

GRAVY (calculated)

0.355

Length

264 amino acids

Sequence
(BLAST)

001: MSDPTAAAAA AAGDAVFERC LLALYLISPL TVLALRFISA PYGKLSRPGW GPVLPAPLAW FLMESPTLWL PPLVLLRSPP PRLSGPLAAL PAALYAFHYV
101: HRTLVHPLRL ACLRRATAPV PLLIAACAFG FSLLNAYVQA RSFALHAGRP ASPARCLAGL ALFAWGMRTN IAADKELLRL KEAGGGYKIP RGGWFDLVTS
201: PNYFGETVEW LGFAVVAWTP AAWAFFLYTC ANLGPRARDH RRWYVQKFGG EYPASRKAFI PYIY

Best Arabidopsis Sequence Match ( AT2G38050.1 )
(BLAST)

001: MEEIADKTFF RYCLLTLIFA GPPTAVLLKF LQAPYGKHNR TGWGPTVSPP IAWFVMESPT LWLTLLLFPF GRHALNPKSL LLFSPYLIHY FHRTIIYPLR
101: LFRSSFPAGK NGFPITIAAL AFTFNLLNGY IQARWVSHYK DDYEDGNWFW WRFVIGMVVF ITGMYINITS DRTLVRLKKE NRGGYVIPRG GWFELVSCPN
201: YFGEAIEWLG WAVMTWSWAG IGFFLYTCSN LFPRARASHK WYIAKFKEEY PKTRKAVIPF VY

Arabidopsis Description

DET2Steroid 5-alpha-reductase DET2 [Source:UniProtKB/Swiss-Prot;Acc:Q38944]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.