Factsheet for GSMUA_Achr4P11670_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 6
plasma membrane 7
endoplasmic reticulum 5
vacuole 5
cytosol 2
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	golgi, mitochondrion, peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017142.1-P	Field mustard	endoplasmic reticulum, plastid	46.62	60.19
VIT_08s0007g01760.t01	Wine grape	endoplasmic reticulum	56.39	58.37
PGSC0003DMT400052432	Potato	endoplasmic reticulum, plasma membrane	56.02	57.53
CDX93333	Canola	cytosol, endoplasmic reticulum, plasma membrane	55.64	56.7
CDY18409	Canola	cytosol, endoplasmic reticulum, plasma membrane	55.64	56.49
AT2G38050.1	Thale cress	endoplasmic reticulum	55.26	56.11
KRH27711	Soybean	endoplasmic reticulum, plasma membrane	55.26	55.89
KRH49269	Soybean	endoplasmic reticulum, plasma membrane	55.26	55.89
Solyc09g013070.2.1	Tomato	endoplasmic reticulum, extracellular	27.07	54.96
PGSC0003DMT400049423	Potato	endoplasmic reticulum, plastid	48.5	53.97
OQU87873	Sorghum	plasma membrane	52.26	52.65
Zm00001d042843_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	51.13	51.91
Solyc10g086500.1.1	Tomato	extracellular, plasma membrane	50.0	51.75
TraesCS3D01G359100.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	50.38	50.38
TraesCS3B01G397800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	50.75	50.19
TraesCS3A01G366000.1	Wheat	plasma membrane	50.38	49.63
Os01t0851600-01	Rice	endoplasmic reticulum, golgi	50.0	49.63
HORVU3Hr1G085400.1	Barley	plasma membrane	50.0	49.08
Os11t0184100-01	Rice	endoplasmic reticulum, plasma membrane, plastid	48.87	47.79
GSMUA_Achr2P12820_001	Banana	peroxisome, plasma membrane, plastid	19.17	19.25
GSMUA_Achr5P02670_001	Banana	endoplasmic reticulum	18.8	19.01

Protein Annotations

KEGG:00140+1.3.1.22	KEGG:00905+1.3.1.22	MapMan:11.3.1.3	InterPro:3-oxo-5-alpha-steroid_4-DH	InterPro:3-oxo-5_a-steroid_4-DH_C	GO:GO:0003674
GO:GO:0003824	GO:GO:0003865	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008202	GO:GO:0009058	GO:GO:0009917
GO:GO:0010268	GO:GO:0016020	GO:GO:0016021	GO:GO:0016132	GO:GO:0016627	GO:GO:0050213
GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr4G11670_001	EnsemblPlants:GSMUA_Achr4P11670_001	EnsemblPlants:GSMUA_Achr4T11670_001	InterPro:IPR001104	UniProt:M0SN32
PFAM:PF02544	PIRSF:PIRSF015596	PFscan:PS50244	PANTHER:PTHR10556	PANTHER:PTHR10556:SF37	TMHMM:TMhelix
UniParc:UPI0002960B2A	SEG:seg	:	:	:	:

Description

Probable steroid reductase DET2 [Source:GMGC_GENE;Acc:GSMUA_Achr4G11670_001]

Coordinates

chr4:+:8423692..8424492

Molecular Weight (calculated)

30793.8 Da

IEP (calculated)

9.659

GRAVY (calculated)

0.196

Length

266 amino acids

Sequence
(BLAST)

001: MDQFDDSKLF WAALVSLYVI CPLTIASLQF LVAPYGRHAQ PGWGPPLPAA LAWFLMESPT LWLTLILYPR GHYWSHPIPL IILTLYLLHY TNRTVIYPLR
101: LHFSKSKKMK PKDFPLYIAL IAFAFNLLNA YLQSRSISHY TDYPTTFSNG WWWICLRVAA GMLLFFWGMA VNISSDSVLL RLKSEGGGYK IPRGGWFELV
201: SCPNYMGEMM EWLGWAIMAW SPASLGFFLY TCSNLGPRAK AHLQWYRQKF GDEYPKSRKA FIPFVY

Best Arabidopsis Sequence Match ( AT2G38050.1 )
(BLAST)

001: MEEIADKTFF RYCLLTLIFA GPPTAVLLKF LQAPYGKHNR TGWGPTVSPP IAWFVMESPT LWLTLLLFPF GRHALNPKSL LLFSPYLIHY FHRTIIYPLR
101: LFRSSFPAGK NGFPITIAAL AFTFNLLNGY IQARWVSHYK DDYEDGNWFW WRFVIGMVVF ITGMYINITS DRTLVRLKKE NRGGYVIPRG GWFELVSCPN
201: YFGEAIEWLG WAVMTWSWAG IGFFLYTCSN LFPRARASHK WYIAKFKEEY PKTRKAVIPF VY

Arabidopsis Description

DET2Steroid 5-alpha-reductase DET2 [Source:UniProtKB/Swiss-Prot;Acc:Q38944]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.