Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P12820_001 | Banana | peroxisome, plasma membrane, plastid | 71.1 | 70.57 |
| KRH70289 | Soybean | endoplasmic reticulum, plasma membrane | 63.12 | 62.41 |
| VIT_13s0067g01830.t01 | Wine grape | plastid | 51.71 | 60.71 |
| KRH70288 | Soybean | mitochondrion | 58.56 | 57.89 |
| AT5G16010.1 | Thale cress | plasma membrane | 58.56 | 57.46 |
| VIT_13s0067g01730.t01 | Wine grape | extracellular, vacuole | 40.3 | 57.3 |
| Bra006336.1-P | Field mustard | plastid | 58.94 | 57.2 |
| CDX78668 | Canola | plastid | 58.94 | 57.2 |
| PGSC0003DMT400002567 | Potato | endoplasmic reticulum, extracellular | 59.32 | 57.14 |
| CDX70668 | Canola | plasma membrane | 58.56 | 56.83 |
| Solyc11g006300.1.1 | Tomato | endoplasmic reticulum | 58.56 | 56.62 |
| CDY26484 | Canola | plastid | 58.17 | 56.25 |
| HORVU1Hr1G013970.1 | Barley | endoplasmic reticulum | 58.94 | 55.96 |
| TraesCS2A01G113600.1 | Wheat | endoplasmic reticulum, vacuole | 57.41 | 55.51 |
| Bra008657.1-P | Field mustard | plastid | 57.79 | 55.47 |
| CDX69482 | Canola | plastid | 57.41 | 55.31 |
| TraesCS2D01G249800.1 | Wheat | plastid | 51.71 | 54.4 |
| CDX85520 | Canola | plasma membrane, plastid | 56.27 | 53.62 |
| Bra023548.1-P | Field mustard | plastid | 55.51 | 53.28 |
| Zm00001d018846_P001 | Maize | peroxisome, plastid, vacuole | 50.95 | 52.96 |
| EER98015 | Sorghum | endoplasmic reticulum, plasma membrane | 56.27 | 51.75 |
| Os07t0162100-00 | Rice | endoplasmic reticulum | 54.37 | 51.62 |
| CDY38137 | Canola | endoplasmic reticulum, nucleus, plasma membrane, plastid | 54.75 | 51.06 |
| Zm00001d018847_P001 | Maize | endoplasmic reticulum, vacuole | 52.09 | 49.64 |
| TraesCS2D01G114200.1 | Wheat | plastid | 57.79 | 47.2 |
| Zm00001d007910_P001 | Maize | plasma membrane | 48.67 | 45.23 |
| TraesCS2B01G269300.1 | Wheat | mitochondrion | 48.67 | 44.29 |
| GSMUA_Achr4P11670_001 | Banana | plasma membrane | 19.01 | 18.8 |
Protein Annotations
| InterPro:3-oxo-5_a-steroid_4-DH_C | MapMan:50.1.3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016627 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr5G02670_001 | EnsemblPlants:GSMUA_Achr5P02670_001 | EnsemblPlants:GSMUA_Achr5T02670_001 |
| InterPro:IPR001104 | UniProt:M0SV46 | PFAM:PF02544 | PFscan:PS50244 | PANTHER:PTHR10556 | PANTHER:PTHR10556:SF35 |
| TMHMM:TMhelix | UniParc:UPI0002952A3E | SEG:seg | : | : | : |
Description
Putative 3-oxo-5-alpha-steroid 4-dehydrogenase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr5G02670_001]
Coordinates
chr5:-:1723891..1726325
Molecular Weight (calculated)
29437.3 Da
IEP (calculated)
9.732
GRAVY (calculated)
0.412
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIWLSIFYP PPPSAFVAAM SAIICASLAY TGLSEVRGRH LQYSKFWNTG RPSDDARRAR ISSRAGMLLL YTPALASAAA SLGVLAGERS LLLGLALLLH
101: FFKRDFEVLF IHQYSGNMML DSAIPISLSY FLNTVCMIYA QYLTQGVPEP AVDLKYAGVV LFLVGIVGNF YHHCLLSKLR EKGDKRYKIP KGGLFGLVIC
201: PHYLFEIIGF IGVSLISQTV YAVSFTTGTV FYLMGRSYAT RRWYLSKFQD FPKEVKALIP YIY
101: FFKRDFEVLF IHQYSGNMML DSAIPISLSY FLNTVCMIYA QYLTQGVPEP AVDLKYAGVV LFLVGIVGNF YHHCLLSKLR EKGDKRYKIP KGGLFGLVIC
201: PHYLFEIIGF IGVSLISQTV YAVSFTTGTV FYLMGRSYAT RRWYLSKFQD FPKEVKALIP YIY
001: MEMVTSFVYP PPPSILLNCM SVVGVAALAN IGWSEIRGNH LKYSKFGVSS SSPQPQKERF GSISSRNGML LLYTPAFLAA ASSFFVVPSD DLRFLLLKSA
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
Arabidopsis Description
3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFS3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.