Factsheet for Bra023548.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85520	Canola	plasma membrane, plastid	96.35	95.65
Bra006336.1-P	Field mustard	plastid	77.01	77.86
Bra008657.1-P	Field mustard	plastid	77.74	77.74
AT5G16010.1	Thale cress	plasma membrane	74.82	76.49
GSMUA_Achr2P12820_001	Banana	peroxisome, plasma membrane, plastid	55.84	57.74
KRH70288	Soybean	mitochondrion	55.84	57.52
KRH70289	Soybean	endoplasmic reticulum, plasma membrane	55.84	57.52
VIT_19s0014g00080.t01	Wine grape	plastid	50.73	57.44
GSMUA_Achr5P02670_001	Banana	endoplasmic reticulum	53.28	55.51
Solyc11g006300.1.1	Tomato	endoplasmic reticulum	51.09	51.47
PGSC0003DMT400002569	Potato	extracellular, peroxisome, plasma membrane	44.53	50.83
PGSC0003DMT400002570	Potato	endoplasmic reticulum, plasma membrane	49.27	50.75
PGSC0003DMT400002567	Potato	endoplasmic reticulum, extracellular	50.37	50.55
HORVU1Hr1G013970.1	Barley	endoplasmic reticulum	50.73	50.18
TraesCS2A01G113600.1	Wheat	endoplasmic reticulum, vacuole	49.63	50.0
TraesCS2D01G249800.1	Wheat	plastid	44.89	49.2
Solyc11g006290.1.1	Tomato	plasma membrane	47.08	49.05
Solyc11g006270.1.1	Tomato	plastid	47.45	48.87
Zm00001d018846_P001	Maize	peroxisome, plastid, vacuole	44.89	48.62
Os07t0162100-00	Rice	endoplasmic reticulum	46.35	45.85
EER98015	Sorghum	endoplasmic reticulum, plasma membrane	47.45	45.45
Zm00001d018847_P001	Maize	endoplasmic reticulum, vacuole	45.62	45.29
TraesCS2D01G114200.1	Wheat	plastid	49.63	42.24
Zm00001d007910_P001	Maize	plasma membrane	42.7	41.34
TraesCS2B01G269300.1	Wheat	mitochondrion	42.34	40.14
Bra017142.1-P	Field mustard	endoplasmic reticulum, plastid	19.71	26.21

Protein Annotations

InterPro:3-oxo-5_a-steroid_4-DH_C	MapMan:50.1.3	EnsemblPlantsGene:Bra023548	EnsemblPlants:Bra023548.1	EnsemblPlants:Bra023548.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016627	GO:GO:0055114
InterPro:IPR001104	UniProt:M4E445	PFAM:PF02544	PFscan:PS50244	PANTHER:PTHR10556	PANTHER:PTHR10556:SF35
TMHMM:TMhelix	UniParc:UPI00025436C8	SEG:seg	:	:	:

Description

AT5G16010 (E=6e-073) | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein

Coordinates

chrA02:+:3880569..3881456

Molecular Weight (calculated)

30564.5 Da

IEP (calculated)

10.091

GRAVY (calculated)

0.341

Length

274 amino acids

Sequence
(BLAST)

001: MEMATSFLFP PPPSILVNTM TVVGLAALPI MVWSEVRGNN LKYSKFNNNN ASSPSSSSQK QRFSSVSSRT GMLCLYTPAF LAASASFFLS PSQDLRFLLL
101: KSALSLHFFK RIFEVLFIHK YSGEMASDAA FTISSGYFSS AALVLYSQSF TLGLPGPGLD LKFYGVVMFV VGIVGNMYHH VLLAKLRKEG EGGGKKEYKI
201: PKGGLFGAVI CPHYMFEILV FWGFFMISQT IYSLSLAMST TFYLVGRSYA TRRWYLSKFD DFPKHIKALI PFVF

Best Arabidopsis Sequence Match ( AT5G16010.1 )
(BLAST)

001: MEMVTSFVYP PPPSILLNCM SVVGVAALAN IGWSEIRGNH LKYSKFGVSS SSPQPQKERF GSISSRNGML LLYTPAFLAA ASSFFVVPSD DLRFLLLKSA
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF

Arabidopsis Description

3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFS3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.