Factsheet for Bra006336.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
endoplasmic reticulum 2
plasma membrane 3
extracellular 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78668	Canola	plastid	99.63	99.63
Bra008657.1-P	Field mustard	plastid	84.87	83.94
AT5G16010.1	Thale cress	plasma membrane	82.66	83.58
Bra023548.1-P	Field mustard	plastid	77.86	77.01
KRH70289	Soybean	endoplasmic reticulum, plasma membrane	57.93	59.02
GSMUA_Achr5P02670_001	Banana	endoplasmic reticulum	57.2	58.94
GSMUA_Achr2P12820_001	Banana	peroxisome, plasma membrane, plastid	57.2	58.49
KRH70288	Soybean	mitochondrion	56.09	57.14
VIT_19s0014g00080.t01	Wine grape	plastid	50.92	57.02
Solyc11g006300.1.1	Tomato	endoplasmic reticulum	53.14	52.94
PGSC0003DMT400002567	Potato	endoplasmic reticulum, extracellular	52.4	52.01
HORVU1Hr1G013970.1	Barley	endoplasmic reticulum	52.4	51.26
PGSC0003DMT400002570	Potato	endoplasmic reticulum, plasma membrane	50.18	51.13
PGSC0003DMT400002569	Potato	extracellular, peroxisome, plasma membrane	45.02	50.83
Solyc11g006270.1.1	Tomato	plastid	49.08	50.0
TraesCS2A01G113600.1	Wheat	endoplasmic reticulum, vacuole	50.18	50.0
Zm00001d018846_P001	Maize	peroxisome, plastid, vacuole	46.13	49.41
TraesCS2D01G249800.1	Wheat	plastid	44.65	48.4
Solyc11g006290.1.1	Tomato	plasma membrane	46.13	47.53
Os07t0162100-00	Rice	endoplasmic reticulum	47.6	46.57
Zm00001d018847_P001	Maize	endoplasmic reticulum, vacuole	47.23	46.38
EER98015	Sorghum	endoplasmic reticulum, plasma membrane	48.34	45.8
Zm00001d007910_P001	Maize	plasma membrane	45.39	43.46
TraesCS2D01G114200.1	Wheat	plastid	50.55	42.55
TraesCS2B01G269300.1	Wheat	mitochondrion	43.17	40.48
Bra017142.1-P	Field mustard	endoplasmic reticulum, plastid	19.19	25.24

Protein Annotations

InterPro:3-oxo-5_a-steroid_4-DH_C	MapMan:50.1.3	EnsemblPlantsGene:Bra006336	EnsemblPlants:Bra006336.1	EnsemblPlants:Bra006336.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016627	GO:GO:0055114
InterPro:IPR001104	UniProt:M4CQ47	PFAM:PF02544	PFscan:PS50244	PANTHER:PTHR10556	PANTHER:PTHR10556:SF35
TMHMM:TMhelix	UniParc:UPI000253F58F	SEG:seg	:	:	:

Description

AT5G16010 (E=2e-103) | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein

Coordinates

chrA03:+:3073451..3074357

Molecular Weight (calculated)

30575.6 Da

IEP (calculated)

10.020

GRAVY (calculated)

0.427

Length

271 amino acids

Sequence
(BLAST)

001: MDMATSFVYP PPPSMLLNTM SVVGLAALAQ IGWSEVRGNH LKYSKFASSS SSASPQPQKH RFGSFSSRIG MLLLYTPAFL AAAASFFVLP SDDLRFLLLK
101: SALSLHFLKR IFEVMFIHKY SGEMAVDSAF LITSSYFSST VLMLYSQSFA LGLTEPHFDL KLLGVVMFVV GIVGNLYHHV LLAKLRNEEG GKKVYKIPKG
201: GLFNTVICPH YLFEIIVFWS FFMVSQTIYS FSFAMGTTFY LIGRSYATRR WYLSKFDDFP KHVKALIPFV F

Best Arabidopsis Sequence Match ( AT5G16010.1 )
(BLAST)

001: MEMVTSFVYP PPPSILLNCM SVVGVAALAN IGWSEIRGNH LKYSKFGVSS SSPQPQKERF GSISSRNGML LLYTPAFLAA ASSFFVVPSD DLRFLLLKSA
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF

Arabidopsis Description

3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFS3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.