Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G013970.1 | Barley | endoplasmic reticulum | 92.65 | 90.97 |
| TraesCS2D01G114200.1 | Wheat | plastid | 97.79 | 82.61 |
| Os07t0162100-00 | Rice | endoplasmic reticulum | 72.43 | 71.12 |
| Zm00001d018846_P001 | Maize | peroxisome, plastid, vacuole | 65.44 | 70.36 |
| EER98015 | Sorghum | endoplasmic reticulum, plasma membrane | 72.43 | 68.88 |
| Zm00001d018847_P001 | Maize | endoplasmic reticulum, vacuole | 65.81 | 64.86 |
| VIT_19s0014g00080.t01 | Wine grape | plastid | 53.68 | 60.33 |
| GSMUA_Achr5P02670_001 | Banana | endoplasmic reticulum | 55.51 | 57.41 |
| GSMUA_Achr2P12820_001 | Banana | peroxisome, plasma membrane, plastid | 53.31 | 54.72 |
| KRH70289 | Soybean | endoplasmic reticulum, plasma membrane | 52.94 | 54.14 |
| Zm00001d007910_P001 | Maize | plasma membrane | 55.88 | 53.71 |
| VIT_13s0067g01830.t01 | Wine grape | plastid | 43.75 | 53.12 |
| KRH70288 | Soybean | mitochondrion | 51.47 | 52.63 |
| AT5G16010.1 | Thale cress | plasma membrane | 51.84 | 52.61 |
| PGSC0003DMT400002567 | Potato | endoplasmic reticulum, extracellular | 52.21 | 52.01 |
| Solyc11g006300.1.1 | Tomato | endoplasmic reticulum | 50.74 | 50.74 |
| CDX78668 | Canola | plastid | 50.37 | 50.55 |
| Bra006336.1-P | Field mustard | plastid | 50.0 | 50.18 |
| CDX85520 | Canola | plasma membrane, plastid | 50.37 | 49.64 |
| Bra008657.1-P | Field mustard | plastid | 50.0 | 49.63 |
| Bra023548.1-P | Field mustard | plastid | 50.0 | 49.63 |
| CDY26484 | Canola | plastid | 49.63 | 49.63 |
| CDX69482 | Canola | plastid | 49.63 | 49.45 |
| CDX70668 | Canola | plasma membrane | 49.26 | 49.45 |
| VIT_13s0067g01730.t01 | Wine grape | extracellular, vacuole | 33.09 | 48.65 |
| CDY38137 | Canola | endoplasmic reticulum, nucleus, plasma membrane, plastid | 50.37 | 48.58 |
| Solyc11g006270.1.1 | Tomato | plastid | 47.43 | 48.5 |
| PGSC0003DMT400002570 | Potato | endoplasmic reticulum, plasma membrane | 47.43 | 48.5 |
| PGSC0003DMT400002569 | Potato | extracellular, peroxisome, plasma membrane | 42.28 | 47.92 |
| Solyc11g006290.1.1 | Tomato | plasma membrane | 44.12 | 45.63 |
| TraesCS3A01G366000.1 | Wheat | plasma membrane | 23.9 | 24.07 |
Protein Annotations
| InterPro:3-oxo-5_a-steroid_4-DH_C | MapMan:50.1.3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016627 | InterPro:IPR001104 | PFAM:PF02544 | PFscan:PS50244 | PANTHER:PTHR10556 |
| PANTHER:PTHR10556:SF35 | SignalP:SignalP-TM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2A01G113600 | EnsemblPlants:TraesCS2A01G113600.1 | SEG:seg |
Description
No Description!
Coordinates
chr2A:+:65173744..65175111
Molecular Weight (calculated)
29460.9 Da
IEP (calculated)
9.291
GRAVY (calculated)
0.389
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MWWPSSLLYP PPASAFVTAM SVVSFASLAS AGLSELRGQH MAYSKFWHVV SGQQQKKGGT GGAQLPGRDG MLVAYAPALV AAAASFVVPG AVEGLRAELL
101: AAALAVHFLK RVLEVLFIHR YSGNMPLNTA LTISSSYLLS AITMIYAQHL AVELPDPSTN LLYPGVLLFA VGIAGNFYHH YLLSQLRKGG DDDKGYKIPK
201: GGLFEFVTCP HYLFEITGFF GFAMISQTVY ALAMASGTAA YLVGRSFATR RWYESKFEEF PASIKALVPY IL
101: AAALAVHFLK RVLEVLFIHR YSGNMPLNTA LTISSSYLLS AITMIYAQHL AVELPDPSTN LLYPGVLLFA VGIAGNFYHH YLLSQLRKGG DDDKGYKIPK
201: GGLFEFVTCP HYLFEITGFF GFAMISQTVY ALAMASGTAA YLVGRSFATR RWYESKFEEF PASIKALVPY IL
001: MEMVTSFVYP PPPSILLNCM SVVGVAALAN IGWSEIRGNH LKYSKFGVSS SSPQPQKERF GSISSRNGML LLYTPAFLAA ASSFFVVPSD DLRFLLLKSA
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
Arabidopsis Description
3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFS3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.