Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 5
- golgi 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g006270.1.1 | Tomato | plastid | 95.11 | 95.11 |
| VIT_13s0067g01830.t01 | Wine grape | plastid | 53.01 | 62.95 |
| PGSC0003DMT400002569 | Potato | extracellular, peroxisome, plasma membrane | 53.01 | 58.75 |
| KRH70288 | Soybean | mitochondrion | 58.65 | 58.65 |
| KRH70289 | Soybean | endoplasmic reticulum, plasma membrane | 57.52 | 57.52 |
| VIT_13s0067g01730.t01 | Wine grape | extracellular, vacuole | 38.72 | 55.68 |
| AT5G16010.1 | Thale cress | plasma membrane | 54.89 | 54.48 |
| PGSC0003DMT400002567 | Potato | endoplasmic reticulum, extracellular | 53.38 | 52.01 |
| CDY26484 | Canola | plastid | 51.88 | 50.74 |
| CDX78668 | Canola | plastid | 51.13 | 50.18 |
| Bra006336.1-P | Field mustard | plastid | 51.13 | 50.18 |
| Bra008657.1-P | Field mustard | plastid | 51.5 | 50.0 |
| CDX69482 | Canola | plastid | 51.13 | 49.82 |
| CDX85520 | Canola | plasma membrane, plastid | 51.5 | 49.64 |
| CDX70668 | Canola | plasma membrane | 50.38 | 49.45 |
| Bra023548.1-P | Field mustard | plastid | 50.75 | 49.27 |
| HORVU1Hr1G013970.1 | Barley | endoplasmic reticulum | 50.0 | 48.01 |
| TraesCS2A01G113600.1 | Wheat | endoplasmic reticulum, vacuole | 48.5 | 47.43 |
| Zm00001d018846_P001 | Maize | peroxisome, plastid, vacuole | 44.74 | 47.04 |
| CDY38137 | Canola | endoplasmic reticulum, nucleus, plasma membrane, plastid | 48.5 | 45.74 |
| TraesCS2D01G249800.1 | Wheat | plastid | 42.48 | 45.2 |
| Zm00001d018847_P001 | Maize | endoplasmic reticulum, vacuole | 44.74 | 43.12 |
| EER98015 | Sorghum | endoplasmic reticulum, plasma membrane | 46.24 | 43.01 |
| Os07t0162100-00 | Rice | endoplasmic reticulum | 44.74 | 42.96 |
| Zm00001d007910_P001 | Maize | plasma membrane | 45.49 | 42.76 |
| TraesCS2D01G114200.1 | Wheat | plastid | 48.5 | 40.06 |
| TraesCS2B01G269300.1 | Wheat | mitochondrion | 40.98 | 37.72 |
| PGSC0003DMT400049423 | Potato | endoplasmic reticulum, plastid | 18.8 | 20.92 |
| PGSC0003DMT400052432 | Potato | endoplasmic reticulum, plasma membrane | 19.92 | 20.46 |
Protein Annotations
| EntrezGene:102600822 | InterPro:3-oxo-5_a-steroid_4-DH_C | MapMan:50.1.3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016627 | GO:GO:0055114 | InterPro:IPR001104 | UniProt:M0ZKB3 |
| PFAM:PF02544 | EnsemblPlantsGene:PGSC0003DMG400000986 | PGSC:PGSC0003DMG400000986 | EnsemblPlants:PGSC0003DMT400002570 | PFscan:PS50244 | PANTHER:PTHR10556 |
| PANTHER:PTHR10556:SF35 | TMHMM:TMhelix | UniParc:UPI0002966952 | RefSeq:XP_006351030.1 | SEG:seg | : |
Description
3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400000986]
Coordinates
chr11:+:6360879..6364126
Molecular Weight (calculated)
29929.0 Da
IEP (calculated)
9.608
GRAVY (calculated)
0.565
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MFQSFMFEEE SSIITAITVI TFLFLAYLGV SEIAGKHLQY SKFWNVNANS GSSSSNFLQG KMSSKLGMFI LYAPASVMGF ASFFMYPDGG TRFMLLKSAV
101: TIHFFKRVLE VLFVHKYSGG MILGSVLLIS SSYFMVAAVM IYIQHLTLQY TEPEIDLKSI GVLIFLVGIS GNFYHHYLLS KLRGSKEKGY KIPQGGLFSM
201: VICPHYLFEI LCFVGISFIS QTSFSFCCAV GVALYLSARS NVTRKWYLSK FENFPKNVKA LIPFVF
101: TIHFFKRVLE VLFVHKYSGG MILGSVLLIS SSYFMVAAVM IYIQHLTLQY TEPEIDLKSI GVLIFLVGIS GNFYHHYLLS KLRGSKEKGY KIPQGGLFSM
201: VICPHYLFEI LCFVGISFIS QTSFSFCCAV GVALYLSARS NVTRKWYLSK FENFPKNVKA LIPFVF
001: MEMVTSFVYP PPPSILLNCM SVVGVAALAN IGWSEIRGNH LKYSKFGVSS SSPQPQKERF GSISSRNGML LLYTPAFLAA ASSFFVVPSD DLRFLLLKSA
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
Arabidopsis Description
3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFS3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.