Factsheet for TraesCS2B01G269300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G249800.1	Wheat	plastid	77.16	89.2
HORVU1Hr1G013970.1	Barley	endoplasmic reticulum	74.05	77.26
Zm00001d018846_P001	Maize	peroxisome, plastid, vacuole	52.25	59.68
Os07t0162100-00	Rice	endoplasmic reticulum	56.06	58.48
EER98015	Sorghum	endoplasmic reticulum, plasma membrane	56.4	56.99
Zm00001d018847_P001	Maize	endoplasmic reticulum, vacuole	51.9	54.35
VIT_19s0014g00080.t01	Wine grape	plastid	43.6	52.07
GSMUA_Achr5P02670_001	Banana	endoplasmic reticulum	44.29	48.67
GSMUA_Achr2P12820_001	Banana	peroxisome, plasma membrane, plastid	43.25	47.17
KRH70289	Soybean	endoplasmic reticulum, plasma membrane	41.87	45.49
AT5G16010.1	Thale cress	plasma membrane	41.87	45.15
KRH70288	Soybean	mitochondrion	41.18	44.74
VIT_13s0067g01830.t01	Wine grape	plastid	34.6	44.64
PGSC0003DMT400002567	Potato	endoplasmic reticulum, extracellular	41.87	44.32
Zm00001d007910_P001	Maize	plasma membrane	42.91	43.82
CDX78668	Canola	plastid	40.83	43.54
Bra006336.1-P	Field mustard	plastid	40.48	43.17
CDX70668	Canola	plasma membrane	40.48	43.17
Solyc11g006300.1.1	Tomato	endoplasmic reticulum	40.48	43.01
CDY38137	Canola	endoplasmic reticulum, nucleus, plasma membrane, plastid	41.87	42.91
Bra008657.1-P	Field mustard	plastid	40.48	42.7
CDY26484	Canola	plastid	40.14	42.65
CDX69482	Canola	plastid	40.14	42.49
CDX85520	Canola	plasma membrane, plastid	40.48	42.39
Bra023548.1-P	Field mustard	plastid	40.14	42.34
Solyc11g006270.1.1	Tomato	plastid	37.72	40.98
PGSC0003DMT400002570	Potato	endoplasmic reticulum, plasma membrane	37.72	40.98
PGSC0003DMT400002569	Potato	extracellular, peroxisome, plasma membrane	33.56	40.42
VIT_13s0067g01730.t01	Wine grape	extracellular, vacuole	25.61	40.0
Solyc11g006290.1.1	Tomato	plasma membrane	35.64	39.16
TraesCS3B01G397800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	20.07	21.56

Protein Annotations

EnsemblPlants:TraesCS2B01G269300.1	EnsemblPlantsGene:TraesCS2B01G269300	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016627	InterPro:3-oxo-5_a-steroid_4-DH_C	InterPro:IPR001104	PANTHER:PTHR10556	PANTHER:PTHR10556:SF35
PFAM:PF02544	PFscan:PS50244	SEG:seg	TMHMM:TMhelix	MapMan:50.1.3	:

Description

No Description!

Coordinates

chr2B:-:364948087..364949733

Molecular Weight (calculated)

31704.4 Da

IEP (calculated)

9.832

GRAVY (calculated)

0.084

Length

289 amino acids

Sequence
(BLAST)

001: MTPRLMGNHL SINQRPEYQG DAQRKGRSRA SSYTKAKWTV EREMWQSSLL YPPPASAFVT AMSVVSFASL ASAGLSELRS QHMAYSKFWH VVSGQQQKKG
101: GTGGVQLSGR DGMLVAYAPA LVAAAASFVV PGTVEGLRAE LLAVHFLKRV LEVLFIHRYS GNMPLNTALA ISSSYLLSAI TMIYAQHLAV GLPDPTTDLL
201: SQLRKGGDDD TGYKIPKGGL FEFVTCPHYL FEITGFFGFA MISQTVYALA MAFGTAAYLV GRSFATRRWY ESKFEEFPTS IKALVPYIL

Best Arabidopsis Sequence Match ( AT5G16010.1 )
(BLAST)

001: MEMVTSFVYP PPPSILLNCM SVVGVAALAN IGWSEIRGNH LKYSKFGVSS SSPQPQKERF GSISSRNGML LLYTPAFLAA ASSFFVVPSD DLRFLLLKSA
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF

Arabidopsis Description

3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFS3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.