Factsheet for VIT_13s0067g01730.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 3
mitochondrion 2
extracellular 3
endoplasmic reticulum 3
plasma membrane 3
golgi 3
nucleus 1
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum, golgi, nucleus, plasma membrane, plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0067g01830.t01	Wine grape	plastid	64.86	53.57
VIT_19s0014g00080.t01	Wine grape	plastid	56.76	43.39
PGSC0003DMT400002569	Potato	extracellular, peroxisome, plasma membrane	55.14	42.5
KRH70289	Soybean	endoplasmic reticulum, plasma membrane	60.0	41.73
GSMUA_Achr5P02670_001	Banana	endoplasmic reticulum	57.3	40.3
GSMUA_Achr2P12820_001	Banana	peroxisome, plasma membrane, plastid	56.22	39.25
KRH70288	Soybean	mitochondrion	56.22	39.1
PGSC0003DMT400002570	Potato	endoplasmic reticulum, plasma membrane	55.68	38.72
Solyc11g006290.1.1	Tomato	plasma membrane	54.59	38.4
Solyc11g006270.1.1	Tomato	plastid	54.05	37.59
Zm00001d018846_P001	Maize	peroxisome, plastid, vacuole	48.11	35.18
HORVU1Hr1G013970.1	Barley	endoplasmic reticulum	49.73	33.21
TraesCS2A01G113600.1	Wheat	endoplasmic reticulum, vacuole	48.65	33.09
EER98015	Sorghum	endoplasmic reticulum, plasma membrane	49.73	32.17
Os07t0162100-00	Rice	endoplasmic reticulum	45.95	30.69
TraesCS2D01G249800.1	Wheat	plastid	38.92	28.8
Zm00001d018847_P001	Maize	endoplasmic reticulum, vacuole	42.7	28.62
Zm00001d007910_P001	Maize	plasma membrane	43.78	28.62
TraesCS2D01G114200.1	Wheat	plastid	48.65	27.95
TraesCS2B01G269300.1	Wheat	mitochondrion	40.0	25.61
VIT_08s0007g01760.t01	Wine grape	endoplasmic reticulum	20.0	14.4

Protein Annotations

InterPro:3-oxo-5_a-steroid_4-DH_C	MapMan:50.1.3	ProteinID:CCB62598	ProteinID:CCB62598.1	UniProt:F6I6N0	EMBL:FN596756
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016627	GO:GO:0055114	InterPro:IPR001104	PFAM:PF02544	PFscan:PS50244	PANTHER:PTHR10556
PANTHER:PTHR10556:SF35	TMHMM:TMhelix	UniParc:UPI000210AB8A	ArrayExpress:VIT_13s0067g01730	EnsemblPlantsGene:VIT_13s0067g01730	EnsemblPlants:VIT_13s0067g01730.t01

Description

No Description!

Coordinates

chr13_random:+:957025..959518

Molecular Weight (calculated)

21256.3 Da

IEP (calculated)

8.669

GRAVY (calculated)

0.428

Length

185 amino acids

Sequence
(BLAST)

001: MVLFIHKYSG GMVLDSGIVI SLSYFTSTAT TIYSQHLVQG SMEPLIDLKC PGILLFLVGI SGNFYHHYLL SKLREKDEKS YKIPRGGLFH QVICPHYLFE
101: ILAFIGVSFM SQTLYYFSFT IGTALYLLGR SYATRKWYLS KFESFPREIK ALLKICMTLE TYICCLLSFH NGLIHSNEFL FSHIV

Best Arabidopsis Sequence Match ( AT5G16010.1 )
(BLAST)

001: MEMVTSFVYP PPPSILLNCM SVVGVAALAN IGWSEIRGNH LKYSKFGVSS SSPQPQKERF GSISSRNGML LLYTPAFLAA ASSFFVVPSD DLRFLLLKSA
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF

Arabidopsis Description

3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFS3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.