Factsheet for GSMUA_Achr2P12820_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, plasma membrane

Predictor Summary:

plastid 3
cytosol 1
peroxisome 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane, plastid
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P02670_001	Banana	endoplasmic reticulum	70.57	71.1
KRH70289	Soybean	endoplasmic reticulum, plasma membrane	61.89	61.65
VIT_13s0067g01830.t01	Wine grape	plastid	51.32	60.71
KRH70288	Soybean	mitochondrion	60.0	59.77
CDX70668	Canola	plasma membrane	59.25	57.93
CDX78668	Canola	plastid	58.87	57.56
AT5G16010.1	Thale cress	plasma membrane	58.11	57.46
Bra006336.1-P	Field mustard	plastid	58.49	57.2
VIT_13s0067g01730.t01	Wine grape	extracellular, vacuole	39.25	56.22
CDY26484	Canola	plastid	57.36	55.88
Bra023548.1-P	Field mustard	plastid	57.74	55.84
Bra008657.1-P	Field mustard	plastid	57.36	55.47
CDX69482	Canola	plastid	56.98	55.31
CDX85520	Canola	plasma membrane, plastid	56.98	54.71
PGSC0003DMT400002567	Potato	endoplasmic reticulum, extracellular	55.47	53.85
Solyc11g006300.1.1	Tomato	endoplasmic reticulum	55.09	53.68
HORVU1Hr1G013970.1	Barley	endoplasmic reticulum	55.85	53.43
TraesCS2A01G113600.1	Wheat	endoplasmic reticulum, vacuole	54.72	53.31
TraesCS2D01G249800.1	Wheat	plastid	49.43	52.4
Zm00001d018846_P001	Maize	peroxisome, plastid, vacuole	49.06	51.38
CDY38137	Canola	endoplasmic reticulum, nucleus, plasma membrane, plastid	53.96	50.71
EER98015	Sorghum	endoplasmic reticulum, plasma membrane	54.34	50.35
Os07t0162100-00	Rice	endoplasmic reticulum	50.94	48.74
Zm00001d018847_P001	Maize	endoplasmic reticulum, vacuole	49.81	47.83
Zm00001d007910_P001	Maize	plasma membrane	50.19	47.0
TraesCS2D01G114200.1	Wheat	plastid	55.09	45.34
TraesCS2B01G269300.1	Wheat	mitochondrion	47.17	43.25
GSMUA_Achr4P11670_001	Banana	plasma membrane	19.25	19.17

Protein Annotations

InterPro:3-oxo-5_a-steroid_4-DH_C	MapMan:50.1.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016627	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr2G12820_001	EnsemblPlants:GSMUA_Achr2P12820_001	EnsemblPlants:GSMUA_Achr2T12820_001
InterPro:IPR001104	UniProt:M0S7H3	PFAM:PF02544	PFscan:PS50244	PANTHER:PTHR10556	PANTHER:PTHR10556:SF35
TMHMM:TMhelix	UniParc:UPI0002968DD3	SEG:seg	:	:	:

Description

Putative 3-oxo-5-alpha-steroid 4-dehydrogenase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr2G12820_001]

Coordinates

chr2:+:15147644..15148578

Molecular Weight (calculated)

29616.7 Da

IEP (calculated)

9.549

GRAVY (calculated)

0.507

Length

265 amino acids

Sequence
(BLAST)

001: MSILSGFLYP PPPSAIITAM TAISSGALVY FGLSEAWGKH LQYSKFWNAG SGPSGEQIRV SSRVGMLLLY TPALAAAAVA FAVPAVVADD RCRLLALALA
101: LHFFKRDFEV LFIHQYSGNM ILDSVIPITL SYFTGTVCMI YAQYLTQGMP GPKLDLKVAG EVFFLVGITG NFYHHYLLSK LREKGDKTYK IPKGGLFGLV
201: ICPHYLFEII IFIGFCLISQ TLYSFLFALG TLWYLMGRSY ATRRWYLSKF ENFPKQVKAL IPYVF

Best Arabidopsis Sequence Match ( AT5G16010.1 )
(BLAST)

001: MEMVTSFVYP PPPSILLNCM SVVGVAALAN IGWSEIRGNH LKYSKFGVSS SSPQPQKERF GSISSRNGML LLYTPAFLAA ASSFFVVPSD DLRFLLLKSA
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF

Arabidopsis Description

3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFS3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.