Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G113600.1 | Wheat | endoplasmic reticulum, vacuole | 90.97 | 92.65 |
| TraesCS2D01G249800.1 | Wheat | plastid | 81.95 | 90.8 |
| TraesCS2D01G114200.1 | Wheat | plastid | 89.89 | 77.33 |
| TraesCS2B01G269300.1 | Wheat | mitochondrion | 77.26 | 74.05 |
| Zm00001d018846_P001 | Maize | peroxisome, plastid, vacuole | 65.34 | 71.54 |
| Os07t0162100-00 | Rice | endoplasmic reticulum | 70.4 | 70.4 |
| EER98015 | Sorghum | endoplasmic reticulum, plasma membrane | 70.4 | 68.18 |
| Zm00001d018847_P001 | Maize | endoplasmic reticulum, vacuole | 63.9 | 64.13 |
| VIT_19s0014g00080.t01 | Wine grape | plastid | 53.79 | 61.57 |
| GSMUA_Achr5P02670_001 | Banana | endoplasmic reticulum | 55.96 | 58.94 |
| KRH70289 | Soybean | endoplasmic reticulum, plasma membrane | 53.79 | 56.02 |
| GSMUA_Achr2P12820_001 | Banana | peroxisome, plasma membrane, plastid | 53.43 | 55.85 |
| VIT_13s0067g01830.t01 | Wine grape | plastid | 45.13 | 55.8 |
| AT5G16010.1 | Thale cress | plasma membrane | 52.35 | 54.1 |
| Zm00001d007910_P001 | Maize | plasma membrane | 54.51 | 53.36 |
| CDX78668 | Canola | plastid | 51.62 | 52.77 |
| KRH70288 | Soybean | mitochondrion | 50.54 | 52.63 |
| Bra006336.1-P | Field mustard | plastid | 51.26 | 52.4 |
| PGSC0003DMT400002567 | Potato | endoplasmic reticulum, extracellular | 51.62 | 52.38 |
| CDX70668 | Canola | plasma membrane | 50.54 | 51.66 |
| CDY26484 | Canola | plastid | 50.18 | 51.1 |
| Solyc11g006300.1.1 | Tomato | endoplasmic reticulum | 50.18 | 51.1 |
| Bra008657.1-P | Field mustard | plastid | 50.18 | 50.73 |
| Bra023548.1-P | Field mustard | plastid | 50.18 | 50.73 |
| CDX85520 | Canola | plasma membrane, plastid | 50.54 | 50.72 |
| CDY38137 | Canola | endoplasmic reticulum, nucleus, plasma membrane, plastid | 51.62 | 50.71 |
| CDX69482 | Canola | plastid | 49.82 | 50.55 |
| PGSC0003DMT400002570 | Potato | endoplasmic reticulum, plasma membrane | 48.01 | 50.0 |
| VIT_13s0067g01730.t01 | Wine grape | extracellular, vacuole | 33.21 | 49.73 |
| Solyc11g006270.1.1 | Tomato | plastid | 47.29 | 49.25 |
| PGSC0003DMT400002569 | Potato | extracellular, peroxisome, plasma membrane | 42.6 | 49.17 |
| Solyc11g006290.1.1 | Tomato | plasma membrane | 44.4 | 46.77 |
| HORVU3Hr1G085400.1 | Barley | plasma membrane | 22.74 | 23.25 |
Protein Annotations
| InterPro:3-oxo-5_a-steroid_4-DH_C | MapMan:50.1.3 | EMBL:AK363015 | UniProt:F2DGJ8 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016627 | GO:GO:0055114 | EnsemblPlantsGene:HORVU1Hr1G013970 |
| EnsemblPlants:HORVU1Hr1G013970.1 | InterPro:IPR001104 | PFAM:PF02544 | PFscan:PS50244 | PANTHER:PTHR10556 | PANTHER:PTHR10556:SF35 |
| TMHMM:TMhelix | UniParc:UPI0002006351 | SEG:seg | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DGJ8]
Coordinates
chrchr1H:-:38111312..38113007
Molecular Weight (calculated)
30011.7 Da
IEP (calculated)
9.291
GRAVY (calculated)
0.438
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MWPPSLLPAV LYPPPASVFV TAMSVVSFAS LASAGLSELR GQHMAYSKFW HVVSGQQQQQ KKGGTGGALL SSRDGMLVAY APALVAAAAS FVVPGAVEGL
101: RAELLAAALA VHFLKRVLEV LFIHRYSGNM PLNTALTISS SYLLSAITMI YAQHLAVGLP DPTTDLLYPG VLLFTVGIAG NFYHHYLLSQ LRKGGDDDKG
201: YKIPKGGLFE FVTCPHYLFE IIGFFGFAMI SQTVYALAMA SGTAAYLIGR SFATRRWYES KFEEFPTTIK ALIPYIL
101: RAELLAAALA VHFLKRVLEV LFIHRYSGNM PLNTALTISS SYLLSAITMI YAQHLAVGLP DPTTDLLYPG VLLFTVGIAG NFYHHYLLSQ LRKGGDDDKG
201: YKIPKGGLFE FVTCPHYLFE IIGFFGFAMI SQTVYALAMA SGTAAYLIGR SFATRRWYES KFEEFPTTIK ALIPYIL
001: MEMVTSFVYP PPPSILLNCM SVVGVAALAN IGWSEIRGNH LKYSKFGVSS SSPQPQKERF GSISSRNGML LLYTPAFLAA ASSFFVVPSD DLRFLLLKSA
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
Arabidopsis Description
3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFS3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.