Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- endoplasmic reticulum 3
- golgi 3
- extracellular 2
- vacuole 2
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400002569 | Potato | extracellular, peroxisome, plasma membrane | 85.55 | 93.75 |
| VIT_13s0067g01830.t01 | Wine grape | plastid | 50.95 | 59.82 |
| VIT_13s0067g01730.t01 | Wine grape | extracellular, vacuole | 38.4 | 54.59 |
| KRH70289 | Soybean | endoplasmic reticulum, plasma membrane | 55.13 | 54.51 |
| Solyc11g006270.1.1 | Tomato | plastid | 54.37 | 53.76 |
| Solyc11g006300.1.1 | Tomato | endoplasmic reticulum | 54.75 | 52.94 |
| KRH70288 | Soybean | mitochondrion | 53.23 | 52.63 |
| AT5G16010.1 | Thale cress | plasma membrane | 49.05 | 48.13 |
| Bra023548.1-P | Field mustard | plastid | 49.05 | 47.08 |
| CDX85520 | Canola | plasma membrane, plastid | 49.05 | 46.74 |
| CDX70668 | Canola | plasma membrane | 47.91 | 46.49 |
| Bra008657.1-P | Field mustard | plastid | 48.29 | 46.35 |
| CDY26484 | Canola | plastid | 47.91 | 46.32 |
| CDX69482 | Canola | plastid | 47.91 | 46.15 |
| Bra006336.1-P | Field mustard | plastid | 47.53 | 46.13 |
| CDX78668 | Canola | plastid | 47.53 | 46.13 |
| CDY38137 | Canola | endoplasmic reticulum, nucleus, plasma membrane, plastid | 49.05 | 45.74 |
| Zm00001d018846_P001 | Maize | peroxisome, plastid, vacuole | 43.35 | 45.06 |
| HORVU1Hr1G013970.1 | Barley | endoplasmic reticulum | 46.77 | 44.4 |
| TraesCS2A01G113600.1 | Wheat | endoplasmic reticulum, vacuole | 45.63 | 44.12 |
| Os07t0162100-00 | Rice | endoplasmic reticulum | 45.25 | 42.96 |
| EER98015 | Sorghum | endoplasmic reticulum, plasma membrane | 45.25 | 41.61 |
| TraesCS2D01G249800.1 | Wheat | plastid | 39.54 | 41.6 |
| Zm00001d018847_P001 | Maize | endoplasmic reticulum, vacuole | 41.83 | 39.86 |
| Zm00001d007910_P001 | Maize | plasma membrane | 42.21 | 39.22 |
| TraesCS2D01G114200.1 | Wheat | plastid | 44.87 | 36.65 |
| TraesCS2B01G269300.1 | Wheat | mitochondrion | 39.16 | 35.64 |
| Solyc10g086500.1.1 | Tomato | extracellular, plasma membrane | 20.53 | 21.01 |
| Solyc09g013070.2.1 | Tomato | endoplasmic reticulum, extracellular | 10.27 | 20.61 |
Protein Annotations
| InterPro:3-oxo-5_a-steroid_4-DH_C | MapMan:50.1.3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016491 | GO:GO:0016627 | GO:GO:0055114 | InterPro:IPR001104 | UniProt:K4D4P2 |
| PFAM:PF02544 | PFscan:PS50244 | PANTHER:PTHR10556 | PANTHER:PTHR10556:SF35 | EnsemblPlantsGene:Solyc11g006290.1 | EnsemblPlants:Solyc11g006290.1.1 |
| TMHMM:TMhelix | UniParc:UPI0002769DC1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr11:-:1022215..1023710
Molecular Weight (calculated)
30453.9 Da
IEP (calculated)
10.251
GRAVY (calculated)
0.498
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQIFREILF QEPNSIFIKV MIMINLIFSA ILGYSEGSGK QNLEYSKFWN LKSQEKIKIP SKIGMIIAYT PSLITCLSFF WIFPNSGIRF FMLNFAITIH
101: FFKRLLEVLF VHKYSGSMAM KSAITISSSY FIAFSSIIYI QHLTKGSIEP IIDLKYSGFI VFLVGIIGNF YHHFILSKIR KKSESGYKIP KGGLFNLVIC
201: PHYFFEIVTF FGFSLISQTL FSFSSTIGTL FYLMGRSYAT RKWYISKFED FPRNVKALIP FVF
101: FFKRLLEVLF VHKYSGSMAM KSAITISSSY FIAFSSIIYI QHLTKGSIEP IIDLKYSGFI VFLVGIIGNF YHHFILSKIR KKSESGYKIP KGGLFNLVIC
201: PHYFFEIVTF FGFSLISQTL FSFSSTIGTL FYLMGRSYAT RKWYISKFED FPRNVKALIP FVF
001: MEMVTSFVYP PPPSILLNCM SVVGVAALAN IGWSEIRGNH LKYSKFGVSS SSPQPQKERF GSISSRNGML LLYTPAFLAA ASSFFVVPSD DLRFLLLKSA
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
Arabidopsis Description
3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFS3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.