Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- peroxisome 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G113600.1 | Wheat | endoplasmic reticulum, vacuole | 71.12 | 72.43 |
| HORVU1Hr1G013970.1 | Barley | endoplasmic reticulum | 70.4 | 70.4 |
| Zm00001d018846_P001 | Maize | peroxisome, plastid, vacuole | 63.18 | 69.17 |
| TraesCS2D01G249800.1 | Wheat | plastid | 61.37 | 68.0 |
| EER98015 | Sorghum | endoplasmic reticulum, plasma membrane | 70.04 | 67.83 |
| Zm00001d018847_P001 | Maize | endoplasmic reticulum, vacuole | 65.7 | 65.94 |
| TraesCS2D01G114200.1 | Wheat | plastid | 70.04 | 60.25 |
| Zm00001d007910_P001 | Maize | plasma membrane | 58.48 | 57.24 |
| VIT_19s0014g00080.t01 | Wine grape | plastid | 49.82 | 57.02 |
| TraesCS2B01G269300.1 | Wheat | mitochondrion | 58.48 | 56.06 |
| GSMUA_Achr5P02670_001 | Banana | endoplasmic reticulum | 51.62 | 54.37 |
| VIT_13s0067g01830.t01 | Wine grape | plastid | 41.88 | 51.79 |
| KRH70289 | Soybean | endoplasmic reticulum, plasma membrane | 49.46 | 51.5 |
| GSMUA_Achr2P12820_001 | Banana | peroxisome, plasma membrane, plastid | 48.74 | 50.94 |
| AT5G16010.1 | Thale cress | plasma membrane | 47.29 | 48.88 |
| PGSC0003DMT400002567 | Potato | endoplasmic reticulum, extracellular | 48.01 | 48.72 |
| PGSC0003DMT400002569 | Potato | extracellular, peroxisome, plasma membrane | 41.88 | 48.33 |
| KRH70288 | Soybean | mitochondrion | 46.21 | 48.12 |
| Bra006336.1-P | Field mustard | plastid | 46.57 | 47.6 |
| CDX78668 | Canola | plastid | 46.57 | 47.6 |
| Solyc11g006300.1.1 | Tomato | endoplasmic reticulum | 46.57 | 47.43 |
| CDX70668 | Canola | plasma membrane | 46.21 | 47.23 |
| CDY26484 | Canola | plastid | 45.85 | 46.69 |
| CDX85520 | Canola | plasma membrane, plastid | 46.21 | 46.38 |
| Bra023548.1-P | Field mustard | plastid | 45.85 | 46.35 |
| CDY38137 | Canola | endoplasmic reticulum, nucleus, plasma membrane, plastid | 46.93 | 46.1 |
| Bra008657.1-P | Field mustard | plastid | 45.49 | 45.99 |
| VIT_13s0067g01730.t01 | Wine grape | extracellular, vacuole | 30.69 | 45.95 |
| CDX69482 | Canola | plastid | 45.13 | 45.79 |
| Solyc11g006290.1.1 | Tomato | plasma membrane | 42.96 | 45.25 |
| PGSC0003DMT400002570 | Potato | endoplasmic reticulum, plasma membrane | 42.96 | 44.74 |
| Solyc11g006270.1.1 | Tomato | plastid | 42.96 | 44.74 |
| Os01t0851600-01 | Rice | endoplasmic reticulum, golgi | 22.74 | 23.51 |
| Os11t0184100-01 | Rice | endoplasmic reticulum, plasma membrane, plastid | 22.74 | 23.16 |
Protein Annotations
| InterPro:3-oxo-5_a-steroid_4-DH_C | EntrezGene:4342458 | MapMan:50.1.3 | ProteinID:BAC15959.1 | ProteinID:BAF20859.1 | ProteinID:BAT00172.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 |
| GO:GO:0016627 | GO:GO:0055114 | InterPro:IPR001104 | EnsemblPlantsGene:Os07g0162100 | EnsemblPlants:Os07t0162100-00 | PFAM:PF02544 |
| PFscan:PS50244 | PANTHER:PTHR10556 | PANTHER:PTHR10556:SF35 | UniProt:Q8H539 | TMHMM:TMhelix | UniParc:UPI000005E69A |
| RefSeq:XP_015645645.1 | SEG:seg | : | : | : | : |
Description
3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein. (Os07t0162100-00)
Coordinates
chr7:-:3316476..3318170
Molecular Weight (calculated)
29216.5 Da
IEP (calculated)
9.522
GRAVY (calculated)
0.490
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MWWWPAFLYP PPAPAFVAAA SVAQFALLAN AGLGELRGEH MAYSKFWQVV AGKKKNGGGG GGGALLPSRQ GMLVAYVPAF VAAAASFAVP GAVVGVRAQV
101: LSAALTVHFL KRILEVLFIH QYSGSMPLNT AATISSSYLV ITATMIYAQH LAAGLPDPPV DLLYPGVAAF AVGIAGNFYH HYLLSQLRNA AGGSGGGERQ
201: YRIPTGGLFG LAACPHYLFE IVGFFGFAMI AQTAHALAVA SGTVAYLAGR SCATRRWYES KFEDFPDSIK ALVPYIL
101: LSAALTVHFL KRILEVLFIH QYSGSMPLNT AATISSSYLV ITATMIYAQH LAAGLPDPPV DLLYPGVAAF AVGIAGNFYH HYLLSQLRNA AGGSGGGERQ
201: YRIPTGGLFG LAACPHYLFE IVGFFGFAMI AQTAHALAVA SGTVAYLAGR SCATRRWYES KFEDFPDSIK ALVPYIL
001: MEMVTSFVYP PPPSILLNCM SVVGVAALAN IGWSEIRGNH LKYSKFGVSS SSPQPQKERF GSISSRNGML LLYTPAFLAA ASSFFVVPSD DLRFLLLKSA
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
Arabidopsis Description
3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFS3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.