Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g006300.1.1 | Tomato | endoplasmic reticulum | 91.21 | 91.54 |
| GSMUA_Achr5P02670_001 | Banana | endoplasmic reticulum | 57.14 | 59.32 |
| AT5G16010.1 | Thale cress | plasma membrane | 55.68 | 56.72 |
| PGSC0003DMT400002569 | Potato | extracellular, peroxisome, plasma membrane | 49.45 | 56.25 |
| GSMUA_Achr2P12820_001 | Banana | peroxisome, plasma membrane, plastid | 53.85 | 55.47 |
| CDY26484 | Canola | plastid | 54.58 | 54.78 |
| Bra008657.1-P | Field mustard | plastid | 53.85 | 53.65 |
| CDX69482 | Canola | plastid | 53.48 | 53.48 |
| PGSC0003DMT400002570 | Potato | endoplasmic reticulum, plasma membrane | 52.01 | 53.38 |
| CDX70668 | Canola | plasma membrane | 52.38 | 52.77 |
| Bra006336.1-P | Field mustard | plastid | 52.01 | 52.4 |
| TraesCS2A01G113600.1 | Wheat | endoplasmic reticulum, vacuole | 52.01 | 52.21 |
| CDX78668 | Canola | plastid | 51.65 | 52.03 |
| HORVU1Hr1G013970.1 | Barley | endoplasmic reticulum | 52.38 | 51.62 |
| Zm00001d018846_P001 | Maize | peroxisome, plastid, vacuole | 47.25 | 50.99 |
| Bra023548.1-P | Field mustard | plastid | 50.55 | 50.37 |
| CDX85520 | Canola | plasma membrane, plastid | 50.92 | 50.36 |
| EER98015 | Sorghum | endoplasmic reticulum, plasma membrane | 52.01 | 49.65 |
| CDY38137 | Canola | endoplasmic reticulum, nucleus, plasma membrane, plastid | 50.92 | 49.29 |
| TraesCS2D01G249800.1 | Wheat | plastid | 44.69 | 48.8 |
| Os07t0162100-00 | Rice | endoplasmic reticulum | 48.72 | 48.01 |
| Zm00001d018847_P001 | Maize | endoplasmic reticulum, vacuole | 46.52 | 46.01 |
| TraesCS2D01G114200.1 | Wheat | plastid | 52.38 | 44.41 |
| TraesCS2B01G269300.1 | Wheat | mitochondrion | 44.32 | 41.87 |
| Zm00001d007910_P001 | Maize | plasma membrane | 40.29 | 38.87 |
| PGSC0003DMT400049423 | Potato | endoplasmic reticulum, plastid | 18.68 | 21.34 |
| PGSC0003DMT400052432 | Potato | endoplasmic reticulum, plasma membrane | 20.15 | 21.24 |
Protein Annotations
| EntrezGene:102599277 | InterPro:3-oxo-5_a-steroid_4-DH_C | MapMan:50.1.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016627 | GO:GO:0055114 | InterPro:IPR001104 |
| UniProt:M0ZKB0 | PFAM:PF02544 | EnsemblPlantsGene:PGSC0003DMG400000984 | PGSC:PGSC0003DMG400000984 | EnsemblPlants:PGSC0003DMT400002567 | PFscan:PS50244 |
| PANTHER:PTHR10556 | PANTHER:PTHR10556:SF35 | TMHMM:TMhelix | UniParc:UPI0002969D50 | RefSeq:XP_006350941.1 | SEG:seg |
Description
3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400000984]
Coordinates
chr11:+:6337201..6339214
Molecular Weight (calculated)
30977.3 Da
IEP (calculated)
9.628
GRAVY (calculated)
0.256
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMSTLLKFL YPPPPSLFIT TMSIISVVSL ANAGLSEIKG KHMQYSKFFG TIKNENDEKK KKKEKKAKIE SKLGMLLLYG PSFLGGISSF AIFPNGDLRF
101: VLVCSALSIH FFKRVLEVLF VHKYSGSMDV EDAIAISLSY FLSTITMIYC QHLSQDLPEP SIDLKYSGYI IFLVGIIGNF YHHILLSKLR TKGEKEYKIP
201: QGGLFDFATC PHYLFEILIF VGVSCTSQTS YAISFTLGTI FYLMGRSIAT RRWYKSKFDD FPKDIKALIP YIF
101: VLVCSALSIH FFKRVLEVLF VHKYSGSMDV EDAIAISLSY FLSTITMIYC QHLSQDLPEP SIDLKYSGYI IFLVGIIGNF YHHILLSKLR TKGEKEYKIP
201: QGGLFDFATC PHYLFEILIF VGVSCTSQTS YAISFTLGTI FYLMGRSIAT RRWYKSKFDD FPKDIKALIP YIF
001: MEMVTSFVYP PPPSILLNCM SVVGVAALAN IGWSEIRGNH LKYSKFGVSS SSPQPQKERF GSISSRNGML LLYTPAFLAA ASSFFVVPSD DLRFLLLKSA
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
Arabidopsis Description
3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFS3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.