Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G013970.1 | Barley | endoplasmic reticulum | 90.8 | 81.95 |
| TraesCS2B01G269300.1 | Wheat | mitochondrion | 89.2 | 77.16 |
| TraesCS2D01G114200.1 | Wheat | plastid | 93.2 | 72.36 |
| Zm00001d018846_P001 | Maize | peroxisome, plastid, vacuole | 63.6 | 62.85 |
| Os07t0162100-00 | Rice | endoplasmic reticulum | 68.0 | 61.37 |
| EER98015 | Sorghum | endoplasmic reticulum, plasma membrane | 68.4 | 59.79 |
| Zm00001d018847_P001 | Maize | endoplasmic reticulum, vacuole | 63.2 | 57.25 |
| VIT_19s0014g00080.t01 | Wine grape | plastid | 52.0 | 53.72 |
| GSMUA_Achr5P02670_001 | Banana | endoplasmic reticulum | 54.4 | 51.71 |
| GSMUA_Achr2P12820_001 | Banana | peroxisome, plasma membrane, plastid | 52.4 | 49.43 |
| AT5G16010.1 | Thale cress | plasma membrane | 51.2 | 47.76 |
| KRH70289 | Soybean | endoplasmic reticulum, plasma membrane | 50.4 | 47.37 |
| KRH70288 | Soybean | mitochondrion | 49.6 | 46.62 |
| Zm00001d007910_P001 | Maize | plasma membrane | 51.6 | 45.58 |
| Bra008657.1-P | Field mustard | plastid | 49.6 | 45.26 |
| CDY26484 | Canola | plastid | 49.2 | 45.22 |
| CDX69482 | Canola | plastid | 49.2 | 45.05 |
| CDX70668 | Canola | plasma membrane | 48.8 | 45.02 |
| CDX78668 | Canola | plastid | 48.8 | 45.02 |
| CDX85520 | Canola | plasma membrane, plastid | 49.6 | 44.93 |
| Bra023548.1-P | Field mustard | plastid | 49.2 | 44.89 |
| PGSC0003DMT400002567 | Potato | endoplasmic reticulum, extracellular | 48.8 | 44.69 |
| Bra006336.1-P | Field mustard | plastid | 48.4 | 44.65 |
| VIT_13s0067g01830.t01 | Wine grape | plastid | 40.0 | 44.64 |
| Solyc11g006300.1.1 | Tomato | endoplasmic reticulum | 48.0 | 44.12 |
| CDY38137 | Canola | endoplasmic reticulum, nucleus, plasma membrane, plastid | 49.6 | 43.97 |
| PGSC0003DMT400002569 | Potato | extracellular, peroxisome, plasma membrane | 40.8 | 42.5 |
| PGSC0003DMT400002570 | Potato | endoplasmic reticulum, plasma membrane | 45.2 | 42.48 |
| Solyc11g006270.1.1 | Tomato | plastid | 44.8 | 42.11 |
| Solyc11g006290.1.1 | Tomato | plasma membrane | 41.6 | 39.54 |
| VIT_13s0067g01730.t01 | Wine grape | extracellular, vacuole | 28.8 | 38.92 |
| TraesCS3D01G359100.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 23.2 | 21.8 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G249800.1 | EnsemblPlantsGene:TraesCS2D01G249800 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016627 | InterPro:3-oxo-5_a-steroid_4-DH_C | InterPro:IPR001104 | PANTHER:PTHR10556 | PANTHER:PTHR10556:SF35 |
| PFAM:PF02544 | PFscan:PS50244 | SEG:seg | TMHMM:TMhelix | MapMan:50.1.3 | : |
Description
No Description!
Coordinates
chr2D:+:296709112..296710796
Molecular Weight (calculated)
27043.8 Da
IEP (calculated)
8.833
GRAVY (calculated)
0.359
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MWPSSLLYPP PASAFVTAVS VVSFASLASA GLSELRGQHM AYSKFWHVVS GQQQKKGGTG GAQLSGRDGM LVAYAPALVA AAASFVVPGT VEGLRAELLA
101: AALAVHFLKR VFEVLFIHRY SGNMPLNTAL TISSSYLLSA ITMIYAQHLT VGLPDPTTDL LSQLRKGGDD DTGYKIPKDG LFEFVTCPHY LFEITGFFGF
201: AMISQTVYAL AMAFGTAAYL VSRSFATRRW YESKFEEFPA SIKALVPYIL
101: AALAVHFLKR VFEVLFIHRY SGNMPLNTAL TISSSYLLSA ITMIYAQHLT VGLPDPTTDL LSQLRKGGDD DTGYKIPKDG LFEFVTCPHY LFEITGFFGF
201: AMISQTVYAL AMAFGTAAYL VSRSFATRRW YESKFEEFPA SIKALVPYIL
001: MEMVTSFVYP PPPSILLNCM SVVGVAALAN IGWSEIRGNH LKYSKFGVSS SSPQPQKERF GSISSRNGML LLYTPAFLAA ASSFFVVPSD DLRFLLLKSA
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
Arabidopsis Description
3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFS3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.