Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008657.1-P | Field mustard | plastid | 99.63 | 99.27 |
| CDY26484 | Canola | plastid | 97.44 | 97.79 |
| CDX70668 | Canola | plasma membrane | 84.98 | 85.61 |
| CDX78668 | Canola | plastid | 84.98 | 85.61 |
| AT5G16010.1 | Thale cress | plasma membrane | 83.88 | 85.45 |
| CDX85520 | Canola | plasma membrane, plastid | 76.56 | 75.72 |
| CDY38137 | Canola | endoplasmic reticulum, nucleus, plasma membrane, plastid | 70.7 | 68.44 |
| KRH70289 | Soybean | endoplasmic reticulum, plasma membrane | 59.71 | 61.28 |
| KRH70288 | Soybean | mitochondrion | 56.78 | 58.27 |
| GSMUA_Achr5P02670_001 | Banana | endoplasmic reticulum | 55.31 | 57.41 |
| GSMUA_Achr2P12820_001 | Banana | peroxisome, plasma membrane, plastid | 55.31 | 56.98 |
| VIT_19s0014g00080.t01 | Wine grape | plastid | 50.18 | 56.61 |
| Solyc11g006300.1.1 | Tomato | endoplasmic reticulum | 53.85 | 54.04 |
| PGSC0003DMT400002567 | Potato | endoplasmic reticulum, extracellular | 53.48 | 53.48 |
| PGSC0003DMT400002570 | Potato | endoplasmic reticulum, plasma membrane | 49.82 | 51.13 |
| PGSC0003DMT400002569 | Potato | extracellular, peroxisome, plasma membrane | 44.69 | 50.83 |
| Zm00001d018846_P001 | Maize | peroxisome, plastid, vacuole | 46.52 | 50.2 |
| HORVU1Hr1G013970.1 | Barley | endoplasmic reticulum | 50.55 | 49.82 |
| TraesCS2A01G113600.1 | Wheat | endoplasmic reticulum, vacuole | 49.45 | 49.63 |
| Solyc11g006270.1.1 | Tomato | plastid | 48.35 | 49.62 |
| TraesCS2D01G249800.1 | Wheat | plastid | 45.05 | 49.2 |
| Solyc11g006290.1.1 | Tomato | plasma membrane | 46.15 | 47.91 |
| EER98015 | Sorghum | endoplasmic reticulum, plasma membrane | 48.35 | 46.15 |
| Os07t0162100-00 | Rice | endoplasmic reticulum | 45.79 | 45.13 |
| Zm00001d018847_P001 | Maize | endoplasmic reticulum, vacuole | 45.05 | 44.57 |
| TraesCS2D01G114200.1 | Wheat | plastid | 49.45 | 41.93 |
| Zm00001d007910_P001 | Maize | plasma membrane | 42.49 | 40.99 |
| TraesCS2B01G269300.1 | Wheat | mitochondrion | 42.49 | 40.14 |
| CDY18409 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 21.61 | 22.52 |
| CDX93333 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 21.25 | 22.22 |
Protein Annotations
| InterPro:3-oxo-5_a-steroid_4-DH_C | MapMan:50.1.3 | GO:A0A078BYP3 | EnsemblPlants:CDX69482 | ProteinID:CDX69482 | ProteinID:CDX69482.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016627 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00135474001 | InterPro:IPR001104 | PFAM:PF02544 | PFscan:PS50244 | PANTHER:PTHR10556 |
| PANTHER:PTHR10556:SF35 | TMHMM:TMhelix | UniParc:UPI0004EE5A79 | SEG:seg | : | : |
Description
BnaA10g18310D
Coordinates
chrLK031790:-:430521..431599
Molecular Weight (calculated)
30761.8 Da
IEP (calculated)
9.727
GRAVY (calculated)
0.370
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMVTSFVYP PPPSILLNTM SVVGLVSLAK VGWSEVRGIH LKYSKFNNNK TSSSSSSPQP QKLPLGSFSS RTGMLLLYTP AFLAAASSFF VLPSDDLRFL
101: LLKSALALHF FKRIFEVMFI HKYSGEMAID SALTITTSYF SSTALLLYSQ NFTLGLPEPG FDLKPLGIVM FVVGIVGNLY HHVLLAKLRN EDGTKEYKIP
201: KGGLFETIIC PHYLFEILVF WSFFMVSQTI YSFSFAMGTT FYLVGRSYAT RSWYLSKFDD FPKHIKALIP FVF
101: LLKSALALHF FKRIFEVMFI HKYSGEMAID SALTITTSYF SSTALLLYSQ NFTLGLPEPG FDLKPLGIVM FVVGIVGNLY HHVLLAKLRN EDGTKEYKIP
201: KGGLFETIIC PHYLFEILVF WSFFMVSQTI YSFSFAMGTT FYLVGRSYAT RSWYLSKFDD FPKHIKALIP FVF
001: MEMVTSFVYP PPPSILLNCM SVVGVAALAN IGWSEIRGNH LKYSKFGVSS SSPQPQKERF GSISSRNGML LLYTPAFLAA ASSFFVVPSD DLRFLLLKSA
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
Arabidopsis Description
3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFS3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.