Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017142.1-P | Field mustard | endoplasmic reticulum, plastid | 77.1 | 98.06 |
| CDX93333 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 95.42 | 95.79 |
| AT2G38050.1 | Thale cress | endoplasmic reticulum | 83.21 | 83.21 |
| PGSC0003DMT400052432 | Potato | endoplasmic reticulum, plasma membrane | 63.36 | 64.09 |
| VIT_08s0007g01760.t01 | Wine grape | endoplasmic reticulum | 62.6 | 63.81 |
| Solyc09g013070.2.1 | Tomato | endoplasmic reticulum, extracellular | 31.3 | 62.6 |
| KRH49269 | Soybean | endoplasmic reticulum, plasma membrane | 62.6 | 62.36 |
| KRH27711 | Soybean | endoplasmic reticulum, plasma membrane | 62.21 | 61.98 |
| PGSC0003DMT400049423 | Potato | endoplasmic reticulum, plastid | 52.29 | 57.32 |
| Solyc10g086500.1.1 | Tomato | extracellular, plasma membrane | 54.96 | 56.03 |
| GSMUA_Achr4P11670_001 | Banana | plasma membrane | 56.49 | 55.64 |
| OQU87873 | Sorghum | plasma membrane | 48.47 | 48.11 |
| Zm00001d042843_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 47.71 | 47.71 |
| TraesCS3D01G359100.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 46.56 | 45.86 |
| TraesCS3A01G366000.1 | Wheat | plasma membrane | 46.95 | 45.56 |
| TraesCS3B01G397800.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 46.18 | 44.98 |
| Os01t0851600-01 | Rice | endoplasmic reticulum, golgi | 45.8 | 44.78 |
| HORVU3Hr1G085400.1 | Barley | plasma membrane | 46.18 | 44.65 |
| Os11t0184100-01 | Rice | endoplasmic reticulum, plasma membrane, plastid | 46.18 | 44.49 |
| CDX70668 | Canola | plasma membrane | 22.9 | 22.14 |
| CDX78668 | Canola | plastid | 22.52 | 21.77 |
| CDX85520 | Canola | plasma membrane, plastid | 22.9 | 21.74 |
| CDY38137 | Canola | endoplasmic reticulum, nucleus, plasma membrane, plastid | 23.28 | 21.63 |
| CDX69482 | Canola | plastid | 22.52 | 21.61 |
| CDY26484 | Canola | plastid | 22.14 | 21.32 |
Protein Annotations
| KEGG:00140+1.3.1.22 | KEGG:00905+1.3.1.22 | MapMan:11.3.1.3 | InterPro:3-oxo-5-alpha-steroid_4-DH | InterPro:3-oxo-5_a-steroid_4-DH_C | GO:A0A078FYY5 |
| UniProt:A0A078FYY5 | EnsemblPlants:CDY18409 | ProteinID:CDY18409 | ProteinID:CDY18409.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003865 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008202 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016627 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00005400001 | InterPro:IPR001104 | PFAM:PF02544 | PIRSF:PIRSF015596 | PFscan:PS50244 |
| PANTHER:PTHR10556 | PANTHER:PTHR10556:SF37 | MetaCyc:PWY-6032 | MetaCyc:PWY-7455 | TMHMM:TMhelix | UniParc:UPI0004EEB453 |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g21780DBnaA04g21780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYY5]
Coordinates
chrLK032085:+:319305..320308
Molecular Weight (calculated)
30305.9 Da
IEP (calculated)
10.021
GRAVY (calculated)
0.145
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEIAADETF FRYCVLTLIF SGPPTAVALK FLQAPYGKHN RSGWGPTLSP PLAWFLMESP TLWLTLLLFP FGRHSHNPKS LLLFSPYLLH YFHRTVIYPL
101: RLLRSSSSAK TGFPMSIAAM AFTFNLLNAY IQARYVSHYK NDYEDGVWFW LRFVIGTVVF VTGMWINITS DRTLVRLKKE NRGGYVIPRG GLFEFVSCPN
201: YFGEVVEWLG WAVMTWSWAG IGFFLYTCSN LIPRARASHV WYGDKFKDEY PKTRKAVIPF VF
101: RLLRSSSSAK TGFPMSIAAM AFTFNLLNAY IQARYVSHYK NDYEDGVWFW LRFVIGTVVF VTGMWINITS DRTLVRLKKE NRGGYVIPRG GLFEFVSCPN
201: YFGEVVEWLG WAVMTWSWAG IGFFLYTCSN LIPRARASHV WYGDKFKDEY PKTRKAVIPF VF
001: MEEIADKTFF RYCLLTLIFA GPPTAVLLKF LQAPYGKHNR TGWGPTVSPP IAWFVMESPT LWLTLLLFPF GRHALNPKSL LLFSPYLIHY FHRTIIYPLR
101: LFRSSFPAGK NGFPITIAAL AFTFNLLNGY IQARWVSHYK DDYEDGNWFW WRFVIGMVVF ITGMYINITS DRTLVRLKKE NRGGYVIPRG GWFELVSCPN
201: YFGEAIEWLG WAVMTWSWAG IGFFLYTCSN LFPRARASHK WYIAKFKEEY PKTRKAVIPF VY
101: LFRSSFPAGK NGFPITIAAL AFTFNLLNGY IQARWVSHYK DDYEDGNWFW WRFVIGMVVF ITGMYINITS DRTLVRLKKE NRGGYVIPRG GWFELVSCPN
201: YFGEAIEWLG WAVMTWSWAG IGFFLYTCSN LFPRARASHK WYIAKFKEEY PKTRKAVIPF VY
Arabidopsis Description
DET2Steroid 5-alpha-reductase DET2 [Source:UniProtKB/Swiss-Prot;Acc:Q38944]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.