Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 1
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400052432 | Potato | endoplasmic reticulum, plasma membrane | 90.84 | 45.95 |
| VIT_08s0007g01760.t01 | Wine grape | endoplasmic reticulum | 65.65 | 33.46 |
| Solyc10g086500.1.1 | Tomato | extracellular, plasma membrane | 64.12 | 32.68 |
| KRH49269 | Soybean | endoplasmic reticulum, plasma membrane | 64.12 | 31.94 |
| KRH27711 | Soybean | endoplasmic reticulum, plasma membrane | 63.36 | 31.56 |
| CDY18409 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 62.6 | 31.3 |
| CDX93333 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 61.83 | 31.03 |
| AT2G38050.1 | Thale cress | endoplasmic reticulum | 61.83 | 30.92 |
| GSMUA_Achr4P11670_001 | Banana | plasma membrane | 54.96 | 27.07 |
| Bra017142.1-P | Field mustard | endoplasmic reticulum, plastid | 37.4 | 23.79 |
| Zm00001d042843_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 44.27 | 22.14 |
| OQU87873 | Sorghum | plasma membrane | 44.27 | 21.97 |
| TraesCS3B01G397800.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 44.27 | 21.56 |
| TraesCS3D01G359100.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 43.51 | 21.43 |
| Os01t0851600-01 | Rice | endoplasmic reticulum, golgi | 43.51 | 21.27 |
| TraesCS3A01G366000.1 | Wheat | plasma membrane | 43.51 | 21.11 |
| HORVU3Hr1G085400.1 | Barley | plasma membrane | 43.51 | 21.03 |
| Os11t0184100-01 | Rice | endoplasmic reticulum, plasma membrane, plastid | 42.75 | 20.59 |
| Solyc11g006290.1.1 | Tomato | plasma membrane | 20.61 | 10.27 |
| Solyc11g006300.1.1 | Tomato | endoplasmic reticulum | 20.61 | 9.93 |
| Solyc11g006270.1.1 | Tomato | plastid | 16.79 | 8.27 |
Protein Annotations
| EnsemblPlants:Solyc09g013070.2.1 | EnsemblPlantsGene:Solyc09g013070.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003865 | GO:GO:0005575 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016132 | GO:GO:0055114 | PANTHER:PTHR10556 | PANTHER:PTHR10556:SF37 | TMHMM:TMhelix | UniParc:UPI000276B723 |
| UniProt:K4CRN3 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:5483367..5484336
Molecular Weight (calculated)
15092.5 Da
IEP (calculated)
10.149
GRAVY (calculated)
0.042
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSDQNLYHY SLLSLFLIGP PTFIACQFLT APYGKHRRSG WGPTISPPLA WFLMESPTLW LTLILFPFGK NHNNPLSLIL ISPYLFHYTN RTIIYPLKLY
101: FNSKGGSPAS GFPKFGEDYP RKRKAVIPFL Y
101: FNSKGGSPAS GFPKFGEDYP RKRKAVIPFL Y
001: MEEIADKTFF RYCLLTLIFA GPPTAVLLKF LQAPYGKHNR TGWGPTVSPP IAWFVMESPT LWLTLLLFPF GRHALNPKSL LLFSPYLIHY FHRTIIYPLR
101: LFRSSFPAGK NGFPITIAAL AFTFNLLNGY IQARWVSHYK DDYEDGNWFW WRFVIGMVVF ITGMYINITS DRTLVRLKKE NRGGYVIPRG GWFELVSCPN
201: YFGEAIEWLG WAVMTWSWAG IGFFLYTCSN LFPRARASHK WYIAKFKEEY PKTRKAVIPF VY
101: LFRSSFPAGK NGFPITIAAL AFTFNLLNGY IQARWVSHYK DDYEDGNWFW WRFVIGMVVF ITGMYINITS DRTLVRLKKE NRGGYVIPRG GWFELVSCPN
201: YFGEAIEWLG WAVMTWSWAG IGFFLYTCSN LFPRARASHK WYIAKFKEEY PKTRKAVIPF VY
Arabidopsis Description
DET2Steroid 5-alpha-reductase DET2 [Source:UniProtKB/Swiss-Prot;Acc:Q38944]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.