Factsheet for Solyc10g086500.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 6
cytosol 1
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	golgi, peroxisome, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400049423	Potato	endoplasmic reticulum, plastid	84.82	91.21
Solyc09g013070.2.1	Tomato	endoplasmic reticulum, extracellular	32.68	64.12
VIT_08s0007g01760.t01	Wine grape	endoplasmic reticulum	59.92	59.92
Bra017142.1-P	Field mustard	endoplasmic reticulum, plastid	47.86	59.71
KRH27711	Soybean	endoplasmic reticulum, plasma membrane	57.59	56.27
KRH49269	Soybean	endoplasmic reticulum, plasma membrane	57.2	55.89
AT2G38050.1	Thale cress	endoplasmic reticulum	56.42	55.34
CDY18409	Canola	cytosol, endoplasmic reticulum, plasma membrane	56.03	54.96
CDX93333	Canola	cytosol, endoplasmic reticulum, plasma membrane	55.64	54.79
GSMUA_Achr4P11670_001	Banana	plasma membrane	51.75	50.0
TraesCS3D01G359100.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	45.14	43.61
OQU87873	Sorghum	plasma membrane	43.97	42.8
Zm00001d042843_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	42.8	41.98
TraesCS3A01G366000.1	Wheat	plasma membrane	43.97	41.85
TraesCS3B01G397800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	43.58	41.64
HORVU3Hr1G085400.1	Barley	plasma membrane	43.19	40.96
Os01t0851600-01	Rice	endoplasmic reticulum, golgi	42.41	40.67
Os11t0184100-01	Rice	endoplasmic reticulum, plasma membrane, plastid	40.86	38.6
Solyc11g006270.1.1	Tomato	plastid	22.18	21.43
Solyc11g006290.1.1	Tomato	plasma membrane	21.01	20.53
Solyc11g006300.1.1	Tomato	endoplasmic reticulum	20.23	19.12

Protein Annotations

KEGG:00140+1.3.1.22	KEGG:00905+1.3.1.22	Gene3D:1.20.120.1630	MapMan:11.3.1.3	InterPro:3-oxo-5-alpha-steroid_4-DH	InterPro:3-oxo-5_a-steroid_4-DH_C
EMBL:AJ786362	GO:GO:0003674	GO:GO:0003824	GO:GO:0003865	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008202
GO:GO:0009058	GO:GO:0009917	GO:GO:0010268	GO:GO:0016020	GO:GO:0016021	GO:GO:0016132
GO:GO:0016491	GO:GO:0016627	GO:GO:0047751	GO:GO:0050213	GO:GO:0055114	InterPro:IPR001104
PFAM:PF02544	PIRSF:PIRSF015596	PFscan:PS50244	PANTHER:PTHR10556	PANTHER:PTHR10556:SF37	UniProt:Q5K2N1
EnsemblPlantsGene:Solyc10g086500.1	EnsemblPlants:Solyc10g086500.1.1	TMHMM:TMhelix	UniParc:UPI00004B2741	:	:

Description

DET2Steroid 5-alpha-reductase DET2 [Source:UniProtKB/Swiss-Prot;Acc:Q5K2N1]

Coordinates

chr10:+:65304702..65305475

Molecular Weight (calculated)

29803.1 Da

IEP (calculated)

9.451

GRAVY (calculated)

0.241

Length

257 amino acids

Sequence
(BLAST)

001: MFSSDENLFN FIVFFILVMA FPTFILCQFF TSPYGKHYTS ADSGTTISPP IAWAFMESPT LWLTIIVFRL GKNYTNPLAF LLISPYLFHY TNRTIIYPLR
101: LRSRNTKNNF PLNIAVTAFI FNLLNAYIQS RWVSHYANYQ EDDWFWVRFG IGLVIFGSGM LLNIWADGVL LGLKSQGGGY KIPRGGLFDY VSSPNYLGEI
201: MEWLGWALMT WSWAGLAFFV YTCANLVPRA VSNHKWYLQK FGEDYPKNRK AVFPFLY

Best Arabidopsis Sequence Match ( AT2G38050.1 )
(BLAST)

001: MEEIADKTFF RYCLLTLIFA GPPTAVLLKF LQAPYGKHNR TGWGPTVSPP IAWFVMESPT LWLTLLLFPF GRHALNPKSL LLFSPYLIHY FHRTIIYPLR
101: LFRSSFPAGK NGFPITIAAL AFTFNLLNGY IQARWVSHYK DDYEDGNWFW WRFVIGMVVF ITGMYINITS DRTLVRLKKE NRGGYVIPRG GWFELVSCPN
201: YFGEAIEWLG WAVMTWSWAG IGFFLYTCSN LFPRARASHK WYIAKFKEEY PKTRKAVIPF VY

Arabidopsis Description

DET2Steroid 5-alpha-reductase DET2 [Source:UniProtKB/Swiss-Prot;Acc:Q38944]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.