Factsheet for AT2G38050.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
endoplasmic reticulum 5
extracellular 3
golgi 3
plasma membrane 3
vacuole 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93333	Canola	cytosol, endoplasmic reticulum, plasma membrane	83.97	84.29
Bra017142.1-P	Field mustard	endoplasmic reticulum, plastid	66.03	83.98
CDY18409	Canola	cytosol, endoplasmic reticulum, plasma membrane	83.21	83.21
VIT_08s0007g01760.t01	Wine grape	endoplasmic reticulum	63.36	64.59
PGSC0003DMT400052432	Potato	endoplasmic reticulum, plasma membrane	62.21	62.93
Solyc09g013070.2.1	Tomato	endoplasmic reticulum, extracellular	30.92	61.83
KRH27711	Soybean	endoplasmic reticulum, plasma membrane	60.31	60.08
KRH49269	Soybean	endoplasmic reticulum, plasma membrane	60.31	60.08
PGSC0003DMT400049423	Potato	endoplasmic reticulum, plastid	53.44	58.58
Solyc10g086500.1.1	Tomato	extracellular, plasma membrane	55.34	56.42
GSMUA_Achr4P11670_001	Banana	plasma membrane	56.11	55.26
OQU87873	Sorghum	plasma membrane	46.95	46.59
Zm00001d042843_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	46.18	46.18
TraesCS3D01G359100.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	45.42	44.74
TraesCS3A01G366000.1	Wheat	plasma membrane	45.8	44.44
HORVU3Hr1G085400.1	Barley	plasma membrane	45.8	44.28
TraesCS3B01G397800.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	45.04	43.87
Os01t0851600-01	Rice	endoplasmic reticulum, golgi	44.27	43.28
Os11t0184100-01	Rice	endoplasmic reticulum, plasma membrane, plastid	44.66	43.01
AT5G16010.1	Thale cress	plasma membrane	18.32	17.91

Protein Annotations

KEGG:00140+1.3.1.22	KEGG:00905+1.3.1.22	MapMan:11.3.1.3	InterPro:3-oxo-5-alpha-steroid_4-DH	InterPro:3-oxo-5_a-steroid_4-DH_C	EntrezGene:818383
UniProt:A0A178VNR4	ProteinID:AEC09484.1	ArrayExpress:AT2G38050	EnsemblPlantsGene:AT2G38050	RefSeq:AT2G38050	TAIR:AT2G38050
RefSeq:AT2G38050-TAIR-G	EnsemblPlants:AT2G38050.1	TAIR:AT2G38050.1	EMBL:AY045926	EMBL:AY079337	Symbol:DET2
GO:GO:0003674	GO:GO:0003824	GO:GO:0003865	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0008202
GO:GO:0009058	GO:GO:0009917	GO:GO:0010268	GO:GO:0016020	GO:GO:0016021	GO:GO:0016132
GO:GO:0016491	GO:GO:0016627	GO:GO:0047751	GO:GO:0050213	GO:GO:0055114	InterPro:IPR001104
RefSeq:NP_181340.1	ProteinID:OAP08037.1	PFAM:PF02544	PIRSF:PIRSF015596	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PFscan:PS50244	PANTHER:PTHR10556
PANTHER:PTHR10556:SF37	UniProt:Q38944	TMHMM:TMhelix	EMBL:U53860	UniParc:UPI00001291E1	SEG:seg

Description

DET2Steroid 5-alpha-reductase DET2 [Source:UniProtKB/Swiss-Prot;Acc:Q38944]

Coordinates

chr2:-:15921136..15922321

Molecular Weight (calculated)

30636.4 Da

IEP (calculated)

10.053

GRAVY (calculated)

0.132

Length

262 amino acids

Sequence
(BLAST)

001: MEEIADKTFF RYCLLTLIFA GPPTAVLLKF LQAPYGKHNR TGWGPTVSPP IAWFVMESPT LWLTLLLFPF GRHALNPKSL LLFSPYLIHY FHRTIIYPLR
101: LFRSSFPAGK NGFPITIAAL AFTFNLLNGY IQARWVSHYK DDYEDGNWFW WRFVIGMVVF ITGMYINITS DRTLVRLKKE NRGGYVIPRG GWFELVSCPN
201: YFGEAIEWLG WAVMTWSWAG IGFFLYTCSN LFPRARASHK WYIAKFKEEY PKTRKAVIPF VY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.