Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023548.1-P | Field mustard | plastid | 95.65 | 96.35 |
| CDY38137 | Canola | endoplasmic reticulum, nucleus, plasma membrane, plastid | 82.61 | 80.85 |
| CDX70668 | Canola | plasma membrane | 76.09 | 77.49 |
| CDX69482 | Canola | plastid | 75.72 | 76.56 |
| CDY26484 | Canola | plastid | 75.36 | 76.47 |
| CDX78668 | Canola | plastid | 75.0 | 76.38 |
| AT5G16010.1 | Thale cress | plasma membrane | 73.55 | 75.75 |
| KRH70288 | Soybean | mitochondrion | 56.52 | 58.65 |
| KRH70289 | Soybean | endoplasmic reticulum, plasma membrane | 56.16 | 58.27 |
| VIT_19s0014g00080.t01 | Wine grape | plastid | 51.09 | 58.26 |
| GSMUA_Achr2P12820_001 | Banana | peroxisome, plasma membrane, plastid | 54.71 | 56.98 |
| GSMUA_Achr5P02670_001 | Banana | endoplasmic reticulum | 53.62 | 56.27 |
| PGSC0003DMT400002570 | Potato | endoplasmic reticulum, plasma membrane | 49.64 | 51.5 |
| Solyc11g006300.1.1 | Tomato | endoplasmic reticulum | 50.72 | 51.47 |
| PGSC0003DMT400002567 | Potato | endoplasmic reticulum, extracellular | 50.36 | 50.92 |
| PGSC0003DMT400002569 | Potato | extracellular, peroxisome, plasma membrane | 44.2 | 50.83 |
| HORVU1Hr1G013970.1 | Barley | endoplasmic reticulum | 50.72 | 50.54 |
| TraesCS2A01G113600.1 | Wheat | endoplasmic reticulum, vacuole | 49.64 | 50.37 |
| Solyc11g006270.1.1 | Tomato | plastid | 47.83 | 49.62 |
| TraesCS2D01G249800.1 | Wheat | plastid | 44.93 | 49.6 |
| Solyc11g006290.1.1 | Tomato | plasma membrane | 46.74 | 49.05 |
| Zm00001d018846_P001 | Maize | peroxisome, plastid, vacuole | 44.93 | 49.01 |
| Os07t0162100-00 | Rice | endoplasmic reticulum | 46.38 | 46.21 |
| Zm00001d018847_P001 | Maize | endoplasmic reticulum, vacuole | 46.01 | 46.01 |
| EER98015 | Sorghum | endoplasmic reticulum, plasma membrane | 47.46 | 45.8 |
| TraesCS2D01G114200.1 | Wheat | plastid | 49.64 | 42.55 |
| Zm00001d007910_P001 | Maize | plasma membrane | 42.03 | 40.99 |
| TraesCS2B01G269300.1 | Wheat | mitochondrion | 42.39 | 40.48 |
| CDY18409 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 21.74 | 22.9 |
| CDX93333 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 21.38 | 22.61 |
Protein Annotations
| InterPro:3-oxo-5_a-steroid_4-DH_C | MapMan:50.1.3 | GO:A0A078D8P2 | EnsemblPlants:CDX85520 | ProteinID:CDX85520 | ProteinID:CDX85520.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016627 |
| EnsemblPlantsGene:GSBRNA2T00143231001 | InterPro:IPR001104 | PFAM:PF02544 | PFscan:PS50244 | PANTHER:PTHR10556 | PANTHER:PTHR10556:SF35 |
| TMHMM:TMhelix | UniParc:UPI0004EF092D | SEG:seg | : | : | : |
Description
BnaA02g02930D
Coordinates
chrLK031842:-:473763..474593
Molecular Weight (calculated)
30683.6 Da
IEP (calculated)
9.936
GRAVY (calculated)
0.347
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMATSFLFP PPPSILVNTM TVVGLAALPV MVLSELRGNN LKYSKFNNNN ASSSPSSLSS SSQRFSSVSS RTGMLCLYTP AFLAASASFF LSPSQDLRFL
101: LLKSALSLHF FKRIFEVLFI HKYSGEMASD AAFTISSGYF SSAALVLYSQ SFTPGLPEPG LDLKFYGVVM FVVGIVGNMY HHVLLAKLRK EGEGGGKKEY
201: KIPKGGLFGA VICPHYMFEI LVFWGFFMIS QTIYSMSLAM STTFYLVGRS YATRRWYLSK FDDFPKHIKA LIPFVF
101: LLKSALSLHF FKRIFEVLFI HKYSGEMASD AAFTISSGYF SSAALVLYSQ SFTPGLPEPG LDLKFYGVVM FVVGIVGNMY HHVLLAKLRK EGEGGGKKEY
201: KIPKGGLFGA VICPHYMFEI LVFWGFFMIS QTIYSMSLAM STTFYLVGRS YATRRWYLSK FDDFPKHIKA LIPFVF
001: MEMVTSFVYP PPPSILLNCM SVVGVAALAN IGWSEIRGNH LKYSKFGVSS SSPQPQKERF GSISSRNGML LLYTPAFLAA ASSFFVVPSD DLRFLLLKSA
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
101: LALHFFKRVF EVLFIHKYSG GMAIDSALTI SSSYFSSTAL MLYSQNLTLG LTEPSFDMKL AGVVMFVVGI VGNLYHHVLL AKLRKEDGKK EYKIPKGGLF
201: DIIICPHYLF EILVFWSFFL ISQTIYSFSF AMGTMLYLIG RSYATRTWYL SKFDDFPKHI KALIPFVF
Arabidopsis Description
3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LFS3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.