CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76535	Soybean	plasma membrane	93.96	70.95
GSMUA_Achr6P32640_001	Banana	endoplasmic reticulum, peroxisome, plastid	49.45	52.02
VIT_18s0122g01110.t01	Wine grape	extracellular, golgi, plasma membrane	47.8	48.33
TraesCS1D01G113000.1	Wheat	cytosol, peroxisome, plasma membrane	48.9	46.6
TraesCS1B01G131800.1	Wheat	cytosol, peroxisome, plasma membrane	48.9	46.6
AT4G35530.1	Thale cress	cytosol, peroxisome, plasma membrane	49.45	46.15
PGSC0003DMT400045098	Potato	plasma membrane	52.2	46.12
TraesCS1A01G111600.1	Wheat	cytosol, peroxisome, plasma membrane	48.35	46.07
CDX72545	Canola	plasma membrane	47.8	44.85
HORVU5Hr1G061500.1	Barley	cytosol, extracellular	14.29	44.07
EES02400	Sorghum	cytosol, peroxisome, plasma membrane	45.6	43.92
Bra017719.1-P	Field mustard	plasma membrane	46.15	43.3
CDX75509	Canola	cytosol, peroxisome, plasma membrane	46.15	43.3
CDY40624	Canola	nucleus, peroxisome, plasma membrane	45.05	43.16
Os05t0165400-01	Rice	plasma membrane	47.25	42.79
Bra011621.1-P	Field mustard	nucleus, peroxisome, plasma membrane	45.6	42.78
OQU77507	Sorghum	plasma membrane	44.51	42.63
Zm00001d039727_P002	Maize	plasma membrane	43.41	41.8
TraesCS3D01G098000.1	Wheat	peroxisome, plasma membrane, plastid	45.6	41.71
TraesCS3B01G113200.2	Wheat	plasma membrane	45.6	40.69
Os01t0166400-02	Rice	cytosol, peroxisome, plasma membrane	42.86	39.39
GSMUA_Achr9P04680_001	Banana	extracellular, plasma membrane, plastid	27.47	37.04
CDX69146	Canola	cytosol	36.81	33.67
TraesCS3A01G097500.1	Wheat	extracellular, golgi, plastid	18.68	33.01
HORVU1Hr1G024510.8	Barley	endoplasmic reticulum, plasma membrane	48.35	30.77
HORVU3Hr1G017600.1	Barley	golgi, plasma membrane, plastid	39.56	26.28

Protein Annotations

KEGG:00563+2.4.1.198	EntrezGene:100527050	MapMan:18.3.4.1.1.3	EMBL:ACUP02006771	EMBL:BT091861	UniProt:C6T352
EnsemblPlantsGene:GLYMA_11G086100	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0017176	InterPro:GPI-GlcNAc_Trfase_PIG-H_dom	EnsemblPlants:KRH28925	ProteinID:KRH28925	ProteinID:KRH28925.1
PFAM:PF10181	PANTHER:PTHR15231	MetaCyc:PWY-6731	MetaCyc:PWY-6735	TMHMM:TMhelix	UniParc:UPI0001B15324
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:6481228..6484662

Molecular Weight (calculated)

20764.9 Da

IEP (calculated)

9.258

GRAVY (calculated)

0.433

Length

182 amino acids

Sequence
(BLAST)

001: MVIFSISNAR YTYVHDQKYP SKDVDIHHIV SRRSNAKYLV YATALLVLAC ALYLYVLKGK SISFVYYSLL FDIFLVKLLL GKPVKKESVV IMPAFGVQLE
101: THYVSGKVIR YFVPIDNILK PVLIECVTPV TCYWTLSLII RGESEMVLVF KNLRPPVKML VHVWKALCAA TDSKEETCTH AE

Best Arabidopsis Sequence Match ( AT4G35530.1 )
(BLAST)

001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS

Arabidopsis Description

Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.