CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40624	Canola	nucleus, peroxisome, plasma membrane	88.66	90.53
CDX75509	Canola	cytosol, peroxisome, plasma membrane	84.54	84.54
AT4G35530.1	Thale cress	cytosol, peroxisome, plasma membrane	79.9	79.49
CDX69146	Canola	cytosol	62.89	61.31
HORVU5Hr1G061500.1	Barley	cytosol, extracellular	14.95	49.15
KRH28925	Soybean	plasma membrane	44.85	47.8
GSMUA_Achr6P32640_001	Banana	endoplasmic reticulum, peroxisome, plastid	40.72	45.66
VIT_18s0122g01110.t01	Wine grape	extracellular, golgi, plasma membrane	41.24	44.44
TraesCS1D01G113000.1	Wheat	cytosol, peroxisome, plasma membrane	41.75	42.41
TraesCS1B01G131800.1	Wheat	cytosol, peroxisome, plasma membrane	41.75	42.41
PGSC0003DMT400045098	Potato	plasma membrane	44.85	42.23
TraesCS1A01G111600.1	Wheat	cytosol, peroxisome, plasma membrane	41.24	41.88
EES02400	Sorghum	cytosol, peroxisome, plasma membrane	39.69	40.74
Zm00001d039727_P002	Maize	plasma membrane	39.18	40.21
OQU77507	Sorghum	plasma membrane	37.63	38.42
TraesCS3D01G098000.1	Wheat	peroxisome, plasma membrane, plastid	39.18	38.19
Os05t0165400-01	Rice	plasma membrane	39.18	37.81
TraesCS3B01G113200.2	Wheat	plasma membrane	39.69	37.75
KRH76535	Soybean	plasma membrane	45.88	36.93
Os01t0166400-02	Rice	cytosol, peroxisome, plasma membrane	37.63	36.87
GSMUA_Achr9P04680_001	Banana	extracellular, plasma membrane, plastid	24.74	35.56
TraesCS3A01G097500.1	Wheat	extracellular, golgi, plastid	16.49	31.07
HORVU1Hr1G024510.8	Barley	endoplasmic reticulum, plasma membrane	41.75	28.32
HORVU3Hr1G017600.1	Barley	golgi, plasma membrane, plastid	36.08	25.55

Protein Annotations

EnsemblPlants:CDX72545	EnsemblPlantsGene:GSBRNA2T00100082001	GO:A0A078C707	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0017176	InterPro:GPI-GlcNAc_Trfase_PIG-H_dom	KEGG:00563+2.4.1.198	MetaCyc:PWY-6731	MetaCyc:PWY-6735	PANTHER:PTHR15231
PANTHER:PTHR15231:SF1	PFAM:PF10181	ProteinID:CDX72545	ProteinID:CDX72545.1	TMHMM:TMhelix	UniParc:UPI0004EC3CB5
UniPathway:UPA00196	MapMan:18.3.4.1.1.3	:	:	:	:

Description

BnaC07g45670D

Coordinates

chrLK031796:-:1791776..1793268

Molecular Weight (calculated)

22072.4 Da

IEP (calculated)

8.614

GRAVY (calculated)

0.357

Length

194 amino acids

Sequence
(BLAST)

001: MVSSSISNKR YTYIHESESE ANREAIDIHH VIINGSRVTG YARLRWLAFF LVALAIIMYF LLGKDNPVRT LSWSCLLSGF FVMIQSRKFV KKESVIIMPT
101: FGIQLETQYL SGKTVSMFIP IGKILKPVLV ECVTPVTCYW SLSLFLRGEE QLTLVFKELR PTLKMLVPIW KALCAVIGTD QSEMMTEEEH VVAG

Best Arabidopsis Sequence Match ( AT4G35530.1 )
(BLAST)

001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS

Arabidopsis Description

Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.