Factsheet for VIT_18s0122g01110.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

plastid 1
golgi 2
plasma membrane 3
extracellular 2
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P32640_001	Banana	endoplasmic reticulum, peroxisome, plastid	46.67	48.55
KRH28925	Soybean	plasma membrane	48.33	47.8
HORVU5Hr1G061500.1	Barley	cytosol, extracellular	14.44	44.07
AT4G35530.1	Thale cress	cytosol, peroxisome, plasma membrane	47.22	43.59
TraesCS1D01G113000.1	Wheat	cytosol, peroxisome, plasma membrane	44.44	41.88
TraesCS1B01G131800.1	Wheat	cytosol, peroxisome, plasma membrane	43.89	41.36
TraesCS1A01G111600.1	Wheat	cytosol, peroxisome, plasma membrane	43.89	41.36
EES02400	Sorghum	cytosol, peroxisome, plasma membrane	43.33	41.27
CDX72545	Canola	plasma membrane	44.44	41.24
CDY40624	Canola	nucleus, peroxisome, plasma membrane	43.33	41.05
PGSC0003DMT400045098	Potato	plasma membrane	46.67	40.78
Bra017719.1-P	Field mustard	plasma membrane	43.89	40.72
CDX75509	Canola	cytosol, peroxisome, plasma membrane	43.33	40.21
Bra011621.1-P	Field mustard	nucleus, peroxisome, plasma membrane	42.78	39.69
Zm00001d039727_P002	Maize	plasma membrane	41.67	39.68
OQU77507	Sorghum	plasma membrane	41.67	39.47
Os05t0165400-01	Rice	plasma membrane	42.78	38.31
GSMUA_Achr9P04680_001	Banana	extracellular, plasma membrane, plastid	28.33	37.78
TraesCS3D01G098000.1	Wheat	peroxisome, plasma membrane, plastid	40.0	36.18
KRH76535	Soybean	plasma membrane	48.33	36.1
Os01t0166400-02	Rice	cytosol, peroxisome, plasma membrane	38.89	35.35
TraesCS3B01G113200.2	Wheat	plasma membrane	39.44	34.8
CDX69146	Canola	cytosol	35.0	31.66
HORVU1Hr1G024510.8	Barley	endoplasmic reticulum, plasma membrane	45.0	28.32
TraesCS3A01G097500.1	Wheat	extracellular, golgi, plastid	13.89	24.27
HORVU3Hr1G017600.1	Barley	golgi, plasma membrane, plastid	33.89	22.26

Protein Annotations

KEGG:00563+2.4.1.198	EntrezGene:100258111	wikigene:100258111	MapMan:18.3.4.1.1.3	ProteinID:CBI40733	ProteinID:CBI40733.3
UniProt:D7UDB8	EMBL:FN596759	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0017176	InterPro:GPI-GlcNAc_Trfase_PIG-H_dom	EntrezGene:LOC100258111	wikigene:LOC100258111
PFAM:PF10181	PANTHER:PTHR15231	PANTHER:PTHR15231:SF1	TMHMM:TMhelix	UniParc:UPI0001985167	ArrayExpress:VIT_18s0122g01110
EnsemblPlantsGene:VIT_18s0122g01110	EnsemblPlants:VIT_18s0122g01110.t01	unigene:Vvi.17914	RefSeq:XP_002272969	RefSeq:XP_002272969.1	RefSeq:XP_010663988.1

Description

No Description!

Coordinates

chr18:-:761517..764169

Molecular Weight (calculated)

20743.9 Da

IEP (calculated)

9.159

GRAVY (calculated)

0.453

Length

180 amino acids

Sequence
(BLAST)

001: MTKIQIVNMR YTYIHDGSVG PHKKIDSHHI VIQKGKAWIF IVHLFLSLFS ATAFYHILEN FFTALLCSII LSAFLVKSLY QKLIVKESVV IFPAFGVQLE
101: THYESGRVFR RFIPIDKILK PVLNEHVTPF TCYWSLALVV RGKEELILAF KEVKLPVKML IPIWKALCVA TCTEETMDTD

Best Arabidopsis Sequence Match ( AT4G35530.1 )
(BLAST)

001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS

Arabidopsis Description

Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.