Factsheet for Zm00001d039727_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, secretory
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02400	Sorghum	cytosol, peroxisome, plasma membrane	84.13	84.13
Os01t0166400-02	Rice	cytosol, peroxisome, plasma membrane	60.85	58.08
TraesCS3D01G098000.1	Wheat	peroxisome, plasma membrane, plastid	59.79	56.78
TraesCS3B01G113200.2	Wheat	plasma membrane	59.79	55.39
TraesCS3A01G097500.1	Wheat	extracellular, golgi, plastid	29.63	54.37
GSMUA_Achr6P32640_001	Banana	endoplasmic reticulum, peroxisome, plastid	49.21	53.76
HORVU5Hr1G061500.1	Barley	cytosol, extracellular	15.34	49.15
KRH28925	Soybean	plasma membrane	41.8	43.41
GSMUA_Achr9P04680_001	Banana	extracellular, plasma membrane, plastid	30.16	42.22
VIT_18s0122g01110.t01	Wine grape	extracellular, golgi, plasma membrane	39.68	41.67
CDY40624	Canola	nucleus, peroxisome, plasma membrane	39.68	39.47
Bra017719.1-P	Field mustard	plasma membrane	40.21	39.18
CDX72545	Canola	plasma membrane	40.21	39.18
AT4G35530.1	Thale cress	cytosol, peroxisome, plasma membrane	39.15	37.95
CDX75509	Canola	cytosol, peroxisome, plasma membrane	37.57	36.6
Bra011621.1-P	Field mustard	nucleus, peroxisome, plasma membrane	37.04	36.08
PGSC0003DMT400045098	Potato	plasma membrane	39.15	35.92
HORVU3Hr1G017600.1	Barley	golgi, plasma membrane, plastid	50.79	35.04
KRH76535	Soybean	plasma membrane	41.27	32.37
CDX69146	Canola	cytosol	32.8	31.16

Protein Annotations

EnsemblPlants:Zm00001d039727_P002	EnsemblPlants:Zm00001d039727_T002	EnsemblPlantsGene:Zm00001d039727	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0017176	InterPro:GPI-GlcNAc_Trfase_PIG-H_dom	KEGG:00563+2.4.1.198
PANTHER:PTHR15231	PANTHER:PTHR15231:SF2	PFAM:PF10181	ProteinID:ONM29817.1	ProteinID:ONM29818.1	ProteinID:ONM29819.1
TMHMM:TMhelix	UniParc:UPI000221F235	UniProt:A0A096QKK3	MapMan:18.3.4.1.1.3	:	:

Description

phosphatidylinositolglycan-related

Coordinates

chr3:-:13017991..13020578

Molecular Weight (calculated)

21428.6 Da

IEP (calculated)

9.130

GRAVY (calculated)

0.244

Length

189 amino acids

Sequence
(BLAST)

001: MRSYMGQQED GMSDGLYTYK HHRERGADIH TIFVKKSKFR ILLSFIGTTF LLVSVCCALL SKDGLCLCSL WSISFASVIA KCLRCDPVKK ESLVIMPTFG
101: IQLEQHFWSG RVHRKFVPIG KILRPVLNEH VTPVSCYWSL ALLVREEYEL MLVFKSLNPP VKMLVPIWKA LCAFVDSNTL GNSALPQST

Best Arabidopsis Sequence Match ( AT4G35530.1 )
(BLAST)

001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS

Arabidopsis Description

Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.