Subcellular Localization
min:
: max
Winner_takes_all: golgi, plastid, extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- golgi 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G113200.2 | Wheat | plasma membrane | 89.32 | 45.1 |
| TraesCS3D01G098000.1 | Wheat | peroxisome, plasma membrane, plastid | 85.44 | 44.22 |
| TraesCS1A01G111600.1 | Wheat | cytosol, peroxisome, plasma membrane | 62.14 | 33.51 |
| EES02400 | Sorghum | cytosol, peroxisome, plasma membrane | 59.22 | 32.28 |
| Os01t0166400-02 | Rice | cytosol, peroxisome, plasma membrane | 61.16 | 31.82 |
| HORVU3Hr1G017600.1 | Barley | golgi, plasma membrane, plastid | 83.5 | 31.39 |
| Zm00001d039727_P002 | Maize | plasma membrane | 54.37 | 29.63 |
| GSMUA_Achr9P04680_001 | Banana | extracellular, plasma membrane, plastid | 33.01 | 25.19 |
| GSMUA_Achr6P32640_001 | Banana | endoplasmic reticulum, peroxisome, plastid | 38.84 | 23.12 |
| KRH28925 | Soybean | plasma membrane | 33.01 | 18.68 |
| CDX72545 | Canola | plasma membrane | 31.07 | 16.49 |
| CDX75509 | Canola | cytosol, peroxisome, plasma membrane | 30.1 | 15.98 |
| Bra017719.1-P | Field mustard | plasma membrane | 30.1 | 15.98 |
| AT4G35530.1 | Thale cress | cytosol, peroxisome, plasma membrane | 30.1 | 15.9 |
| Bra011621.1-P | Field mustard | nucleus, peroxisome, plasma membrane | 29.13 | 15.46 |
| CDY40624 | Canola | nucleus, peroxisome, plasma membrane | 27.18 | 14.74 |
| KRH76535 | Soybean | plasma membrane | 33.98 | 14.52 |
| PGSC0003DMT400045098 | Potato | plasma membrane | 28.16 | 14.08 |
| CDX69146 | Canola | cytosol | 27.18 | 14.07 |
| VIT_18s0122g01110.t01 | Wine grape | extracellular, golgi, plasma membrane | 24.27 | 13.89 |
| HORVU5Hr1G061500.1 | Barley | cytosol, extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G097500.1 | EnsemblPlantsGene:TraesCS3A01G097500 | PANTHER:PTHR15231 | PANTHER:PTHR15231:SF2 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr3A:-:63175050..63176683
Molecular Weight (calculated)
11716.4 Da
IEP (calculated)
8.645
GRAVY (calculated)
0.221
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQQAQGVSS GMYRYMHRCE SGVNIHDVFV ERSAFRVLFS YVGAIFLLAN VCRTLLSQES LCLGSFWSVP FSAIAAKCLQ YKPVKKESLM IMPNFGIQLE
101: QHF
101: QHF
001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS
Arabidopsis Description
Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.