Factsheet for HORVU3Hr1G017600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

nucleus 1
golgi 2
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G097500.1	Wheat	extracellular, golgi, plastid	31.39	83.5
TraesCS3B01G113200.2	Wheat	plasma membrane	50.37	67.65
TraesCS3D01G098000.1	Wheat	peroxisome, plasma membrane, plastid	48.54	66.83
HORVU5Hr1G061500.1	Barley	cytosol, extracellular	12.41	57.63
EES02400	Sorghum	cytosol, peroxisome, plasma membrane	37.59	54.5
Zm00001d039727_P002	Maize	plasma membrane	35.04	50.79
GSMUA_Achr6P32640_001	Banana	endoplasmic reticulum, peroxisome, plastid	31.02	49.13
Os01t0166400-02	Rice	cytosol, peroxisome, plasma membrane	35.4	48.99
GSMUA_Achr9P04680_001	Banana	extracellular, plasma membrane, plastid	21.17	42.96
KRH28925	Soybean	plasma membrane	26.28	39.56
HORVU1Hr1G024510.8	Barley	endoplasmic reticulum, plasma membrane	40.15	38.46
CDX72545	Canola	plasma membrane	25.55	36.08
CDX75509	Canola	cytosol, peroxisome, plasma membrane	25.18	35.57
Bra017719.1-P	Field mustard	plasma membrane	25.18	35.57
CDY40624	Canola	nucleus, peroxisome, plasma membrane	24.09	34.74
Bra011621.1-P	Field mustard	nucleus, peroxisome, plasma membrane	24.45	34.54
VIT_18s0122g01110.t01	Wine grape	extracellular, golgi, plasma membrane	22.26	33.89
AT4G35530.1	Thale cress	cytosol, peroxisome, plasma membrane	23.36	32.82
KRH76535	Soybean	plasma membrane	27.01	30.71
PGSC0003DMT400045098	Potato	plasma membrane	22.99	30.58
CDX69146	Canola	cytosol	19.34	26.63

Protein Annotations

EnsemblPlants:HORVU3Hr1G017600.1	EnsemblPlantsGene:HORVU3Hr1G017600	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740	GO:GO:0017176
InterPro:GPI-GlcNAc_Trfase_PIG-H_dom	KEGG:00563+2.4.1.198	PANTHER:PTHR15231	PANTHER:PTHR15231:SF2	PFAM:PF10181	SEG:seg
UniParc:UPI00029533B7	UniProt:M0WM59	MapMan:18.3.4.1.1.3	:	:	:

Description

Predicted protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M0WM59]

Coordinates

chrchr3H:-:45320233..45323605

Molecular Weight (calculated)

30674.4 Da

IEP (calculated)

9.235

GRAVY (calculated)

-0.055

Length

274 amino acids

Sequence
(BLAST)

001: MKRQVQGISS GMHRYTHRCE SGVNIHDVFV ERSALRVLFS YVGAMCLLAN VCRAFLSKES LCLGSFWSVP FSAIVAKFLQ YKPVKKESLV IMPAFGIQLE
101: PHFWSGRVHR KFMPIGKILK PVLNECVTPV TCYWSLALLL RDEDETMLVF QSSPIRSSSC QPCRRRRRHH HHHHEELFET SVAWAGADKP RGNIAGTLCF
201: ICIPSFHQKP KLNISNGSYR MVCDSSSSSC GVTDGEGKRI RPTHTGLVTV DAGPEYASAM MALSVSAMQW VTPA

Best Arabidopsis Sequence Match ( AT4G35530.1 )
(BLAST)

001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS

Arabidopsis Description

Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.