CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039727_P002	Maize	plasma membrane	84.13	84.13
TraesCS3D01G098000.1	Wheat	peroxisome, plasma membrane, plastid	64.02	60.8
TraesCS3B01G113200.2	Wheat	plasma membrane	65.61	60.78
TraesCS3A01G097500.1	Wheat	extracellular, golgi, plastid	32.28	59.22
OQU77507	Sorghum	plasma membrane	59.26	58.95
Os01t0166400-02	Rice	cytosol, peroxisome, plasma membrane	61.38	58.59
GSMUA_Achr6P32640_001	Banana	endoplasmic reticulum, peroxisome, plastid	51.32	56.07
HORVU5Hr1G061500.1	Barley	cytosol, extracellular	16.4	52.54
KRH28925	Soybean	plasma membrane	43.92	45.6
GSMUA_Achr9P04680_001	Banana	extracellular, plasma membrane, plastid	32.28	45.19
VIT_18s0122g01110.t01	Wine grape	extracellular, golgi, plasma membrane	41.27	43.33
CDX72545	Canola	plasma membrane	40.74	39.69
Bra017719.1-P	Field mustard	plasma membrane	40.21	39.18
AT4G35530.1	Thale cress	cytosol, peroxisome, plasma membrane	39.68	38.46
CDY40624	Canola	nucleus, peroxisome, plasma membrane	38.62	38.42
PGSC0003DMT400045098	Potato	plasma membrane	41.8	38.35
HORVU3Hr1G017600.1	Barley	golgi, plasma membrane, plastid	54.5	37.59
CDX75509	Canola	cytosol, peroxisome, plasma membrane	37.57	36.6
Bra011621.1-P	Field mustard	nucleus, peroxisome, plasma membrane	37.57	36.6
KRH76535	Soybean	plasma membrane	42.86	33.61
CDX69146	Canola	cytosol	31.22	29.65

Protein Annotations

KEGG:00563+2.4.1.198	MapMan:18.3.4.1.1.3	EntrezGene:8078502	UniProt:C5XNI8	EnsemblPlants:EES02400	ProteinID:EES02400
ProteinID:EES02400.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0017176	InterPro:GPI-GlcNAc_Trfase_PIG-H_dom	ProteinID:KXG31786.1	PFAM:PF10181	PANTHER:PTHR15231
PANTHER:PTHR15231:SF2	MetaCyc:PWY-6731	MetaCyc:PWY-6735	EnsemblPlantsGene:SORBI_3003G055900	TMHMM:TMhelix	UniParc:UPI0001A850BC
RefSeq:XP_002457280.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:5007785..5010250

Molecular Weight (calculated)

21137.3 Da

IEP (calculated)

9.068

GRAVY (calculated)

0.310

Length

189 amino acids

Sequence
(BLAST)

001: MGSYMGQQEH VISDGMYNYK HHHAGGADIH VIFVKKSKFR VVLSYIGTML LLATVCCTLL SKDSLCLGSL WSISFASIIA KCLQCDPVKK ESLVIMPTFG
101: VQLEQHFWSG RVHRKFVPIS KILKPVLNEH VTPVACYWSL ALLLREEYEL MLVFKNLNPP VKMLVPIWKA LCAFVGSNTP GNSALPQST

Best Arabidopsis Sequence Match ( AT4G35530.1 )
(BLAST)

001: MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF LLGKDNPART LSWGCLLSGF LVMLHSRKFV KKESVIILPT
101: FGIQLETQYL SGKTVSRFIP IDKILKPVLV ECVTPITCYW SLSLFLRGEE QLTLVFKELR PPLKMLVPIW KALCAAIGTD HQSETIAEEE HDVSS

Arabidopsis Description

Phosphatidylinositolglycan-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VY53]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.